Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01422 ATGGAGTGCATCAATAACCCTACCTCTTGTGAAGGGTCATCATCATCTTCCAAGCACCCCAACAAGAGCAATAGGGAGAAAAAAGGTGTGAGGAAAAGTAACAAAGGAGGAGGAGGAGGAGTGAGGCTTTCCACTGATCCACAAAGCGTGGCAGCCAGAGAAAGAAGGCACAGAATCAGTGACAGGTTCAAGATCCTTCAGAGCATGGTCCCTGGTGGGAGCAAGATGGACACTGTTTCCATGTTGGAGTGTGCCATTCACTACGTCAAGTTCCTCCAGACAGAGATTTTGCTCCACCAAGCATTGATAGACTTTGTAGATGTTGATCATCATGAGTCTCCACTGTTCCTCCCCGCAGAGTATAATAATTTCCCTGATGAACACTCCAATATTTCCCTTCAGCAAAACCCTTCTTCAGTTTCGGTGCATTCTCATCATCATCAGCAGAGTTTACCACAGCTACCACTGTCACAGTGCTACTTTCAAGGTGAAGAAGATTTTAACACCTTTGATGCCATCATGCCACCATGA 531 0.4595 MECINNPTSCEGSSSSSKHPNKSNREKKGVRKSNKGGGGGVRLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLECAIHYVKFLQTEILLHQALIDFVDVDHHESPLFLPAEYNNFPDEHSNISLQQNPSSVSVHSHHHQQSLPQLPLSQCYFQGEEDFNTFDAIMPP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01422 176 CDD bHLH_AtIND_like 44 103 - -
Gma07g01422 176 Pfam Helix-loop-helix DNA-binding domain 53 93 IPR011598 GO:0046983
Gma07g01422 176 MobiDBLite consensus disorder prediction 1 19 - -
Gma07g01422 176 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 166 IPR045843 GO:0003700|GO:0006355
Gma07g01422 176 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 22 166 - -
Gma07g01422 176 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 92 IPR011598 GO:0046983
Gma07g01422 176 Gene3D - 48 100 IPR036638 GO:0046983
Gma07g01422 176 MobiDBLite consensus disorder prediction 1 55 - -
Gma07g01422 176 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 107 IPR036638 GO:0046983
Gma07g01422 176 SMART finulus 49 98 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01422 Gma-Chr7 19133643 19134173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01422 41 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 42.000 4.56e-20 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g01422 HLH 4.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01422 - - gmx:113002129 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01422 07 19133643 19134173 Gma07g01422 07 19133643 19134173 ECH
Gma18g01887 18 51796604 51797134 Gma07g01422 07 19133643 19134173 GST