Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01391 ATGGGCGTGGACTTCTACAAGATTCTTCAGGTAGATAGAAGCGCCAAAGATGAGGATCTCAAGAAAGCATATCGAAGGCTAGCCATGAAGTGGCACCCTGATAAGAACCCTAACAACAAGAGAGAGGCTGAAGCTAAATTCAAGCAAATCTCTGAAGCTTATGATGTTTTGAGTGATCCACAGAAGCGAGGAGTGTATGATCAGTATGGTGAGGAGGGGCTGAATGGGGTGCCGATGGGCGCAGGTGGTTTTCCTGGTGGTGGCGGCGGCGGCAGCAGCGGTGACGGTGGAGCGACGTCATTCCGGTTCAACCCCAGAAGTGCAGATGATATATTTTCGGAGTTTTTCGGGTTTTCGAGACCCTTTGGTGGTGGAATGCCGGACATGGGTGGCCGAGCTGGTGGCTCTGGATTTTCCAGGGGTGGACCGTTTGGTGAGGATATCTTTGCTCAATTTAGAAGTGCAGCTGGGGAGGGCTCTGGACATATGCCAAGGAAAGGTGCAGCCATTGAGAGACCATTGCCTTGTAGCTTGGAGGATTTGTATAAAGGAACTACCAAGAAAATGAAGATTTCAAGGGATGTTAGTGATGCCAGTGGGAGACCCTCCACAGTAGACGAAATCCTTACAATTGAGATAAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCGGAAAAGGGAAATGAGCAGAGAGGAGTTATCCCTTCAGACCTTGTCTTTATTATTGATGAGAAGCCTCATAGTCTCTTTAAAAGGGATGGCAATGATCTTGTTGTCACCCAGAAGATATCGCTTGTAGAAGCCTTGACGGGCTACACAGCGCAGCTGACAACCCTTGATGGGCGGAGTCTTACAATCCCCATTAACTCCACTATTAGTCCGACATATGAAGAAGTTGTCAAAGGAGAGGGTATGCCCATTCCGAAAGAACCTTCCAAGAAAGGGAACTTAAGAATCAAGTTCAATATCAAGTTTCCCTCCAGGCTTACATCGGAACAGAAAAGTGGCATCAAGCGATTATTGACATCTCCCTAA 1041 0.4726 MGVDFYKILQVDRSAKDEDLKKAYRRLAMKWHPDKNPNNKREAEAKFKQISEAYDVLSDPQKRGVYDQYGEEGLNGVPMGAGGFPGGGGGGSSGDGGATSFRFNPRSADDIFSEFFGFSRPFGGGMPDMGGRAGGSGFSRGGPFGEDIFAQFRSAAGEGSGHMPRKGAAIERPLPCSLEDLYKGTTKKMKISRDVSDASGRPSTVDEILTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLVFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRSLTIPINSTISPTYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLLTSP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01391 346 Gene3D - 168 247 - -
Gma07g01391 346 Gene3D - 249 329 - -
Gma07g01391 346 CDD DnaJ 4 59 IPR001623 -
Gma07g01391 346 CDD DnaJ_C 170 331 - -
Gma07g01391 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 171 249 IPR008971 GO:0006457|GO:0051082
Gma07g01391 346 Pfam DnaJ domain 4 67 IPR001623 -
Gma07g01391 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 252 337 IPR008971 GO:0006457|GO:0051082
Gma07g01391 346 Pfam DnaJ C terminal domain 170 328 IPR002939 -
Gma07g01391 346 Gene3D DnaJ domain 3 125 IPR036869 -
Gma07g01391 346 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gma07g01391 346 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gma07g01391 346 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gma07g01391 346 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gma07g01391 346 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 345 - -
Gma07g01391 346 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gma07g01391 346 SUPERFAMILY Chaperone J-domain 3 94 IPR036869 -
Gma07g01391 346 PANTHER BNAANNG28460D PROTEIN 1 345 - -
Gma07g01391 346 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gma07g01391 346 SMART dnaj_3 3 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01391 Gma-Chr7 18481452 18485855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01391 5 69 C2H2 Transcription Factor Family AT1G74250 36.232 1.24e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01391 K09510 - gmx:100781592 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01391 07 18481452 18485855 Gma07g01391 07 18481452 18485855 ECH
Gma18g01852 18 51171123 51176160 Gma07g01391 07 18481452 18485855 GST
Gma07g01391 07 18481452 18485855 Gma03g00458 03 8131917 8136838 PCT
Gma03g00458 03 8131917 8136838 Gma07g01391 07 18481452 18485855 PCT