Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01383 ATGGGTTCTCACCAACAAGAACCATGGCTATTGGAGAATGGGAAACCAAGGGTTTTGACCAAGGAGACCAGGCATGGCCGTTCTGCACACAGAATGTCCTCCACCTCTTTGCGCAAGAAATCTAGCCGAACTCTTGTCTCAAAGGTTCCATGTGCCACTCTCAGAAACTTTCTTTCAAATTTGCAAGAGGTTATTCTTGGCACCAAGCTTTCCATTCTCATCCCTGCTATTCCAGCTGCCATCGTTGCTGAGTGCTTTGGCTTTGGAAGACCTTGGATTTTTATATTAAGCTTACTTGGACTTACACCACTTGCTGAACGTGTGAGCTTCATTACAGAACAAGTTGCCTTTTACACTGGTCCCACAGTTGGAGGACTTCTGAATGCTACATGTGGGAATGTTACGGAGCTCATAATAGCAGTATTTGCCCTTAGCAGTAACAAAATTGCCGTGGTCAAGTATTCTCTGTTGGGTTCTATTCTTTCAAACCTTCTTCTGGTTCTTGGGACCTCTCTATTATGTGGTGGCATTGCAAACGTTGGAGTGGAACAAAAATATGATAGAAGACAAGCAGATGTGAACTCACTTATGCTGTTGTTGGGATTGTTGTGCTACTTGCTTCCAATGCTGTTCAAATACAGTGGTGCCTCAGCTGCTCTCACTGTAGACCCTTCACTGCACTTGTCAAGAGCTTCTAGCATTGTGATGTTGATTGCATATGTTGTCTACATTGTCTTTCAACTGTGGACACACAGGGAGTTATTTGAAGAAGAAGATGACGGTAAAGATGGCGAGGATGGTTCAGAAGAACAAGCTGTGATTGGATTATGGAGTGGCATTGCTTGGTTGGTTGGAATGACTGTATTCATTGCTGTGTTGTCAGAATATGTGGTGGATACAATTGAGGACGCATCAGATTCATGGGGTTTGTCTGTGAGCTTCCTAAGCATAATCTTGCTGCCGATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCCTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCATTAGGTTCAGCAACTCAGATTGCCATGTTTGTGGTCCCATTATGTGTAATCGTTGCTTGGATAATGGGTATCAATATGGACATGAACTTCAACCTCTTAGAGACAGGTTCCCTTGCTTTGGCAATAATAGTCACAGGCTTCACTTTACAGGATGGGACTTCTCACTACATGAAAGGCCTTGTTCTCCTGCTGTGCTACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAACCAAGCTGATGTTACTAACATCACACTTAAACCAGCCACTAATGCAGTTTTAAGCGCTTAA 1350 0.4348 MGSHQQEPWLLENGKPRVLTKETRHGRSAHRMSSTSLRKKSSRTLVSKVPCATLRNFLSNLQEVILGTKLSILIPAIPAAIVAECFGFGRPWIFILSLLGLTPLAERVSFITEQVAFYTGPTVGGLLNATCGNVTELIIAVFALSSNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANVGVEQKYDRRQADVNSLMLLLGLLCYLLPMLFKYSGASAALTVDPSLHLSRASSIVMLIAYVVYIVFQLWTHRELFEEEDDGKDGEDGSEEQAVIGLWSGIAWLVGMTVFIAVLSEYVVDTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVIVAWIMGINMDMNFNLLETGSLALAIIVTGFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPFNNQADVTNITLKPATNAVLSA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01383 449 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 2 433 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma07g01383 449 TIGRFAM caca2: calcium/proton exchanger 56 422 - -
Gma07g01383 449 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 2 433 - -
Gma07g01383 449 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016021|GO:0055085
Gma07g01383 449 Pfam Sodium/calcium exchanger protein 280 417 IPR004837 GO:0016021|GO:0055085
Gma07g01383 449 Gene3D - 273 422 IPR044880 -
Gma07g01383 449 Gene3D - 121 272 IPR044880 -
Gma07g01383 449 TIGRFAM cax: calcium/proton exchanger 74 422 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01383 Gma-Chr7 18311696 18315991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01383 7 427 Antiporters AT2G38170 70.302 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01383 K07300 - gmx:100779440 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01383 07 18311696 18315991 Gma07g01383 07 18311696 18315991 ECH
Gma18g01844 18 51028488 51032123 Gma07g01383 07 18311696 18315991 GST
Gma07g01383 07 18311696 18315991 Gma03g00467 03 8333226 8337310 PCT
Gma03g00467 03 8333226 8337310 Gma07g01383 07 18311696 18315991 PCT