Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01376 ATGCGCAAGTCTTTCAAGGATTCACTCAAAGCTCTTGAAGCTGATATCCAGTTTGCCAACACACTAGCTTCTGAGTATCCAAGTGGTGGTGCCTGCTTCCAATTGAGATTGTCCTACAGCCCAGCTGCTCAATTCTTCCTTTTCCTGGTTCAGTGGACTGATTGTCACCTTGCTGGAGCTTTAGGATTCATCAGAATTCTTATATACAAGGCATATGAAGATGGGAAGACAACCATGTCCATTTATGAAAGAAAAGCCAGTCTAAGGGAGTTCTATGGTGTGGTGTTTCCCTCTTTATTGCAACTTCACAGAGGAATCACCGATGTTGATGACAGGAAACAAAAACATCTATGTGCTACTAAGTATAAGCTTAAAGATTTGACAAGCAAAGGAAACCTTTCTGAAATTGACATGGAGAGGGAATTAGAGTGTGGTATTTGCTTGGAGATAAATAGCAAGGTTGTATTGCCCAACTGCAATCATTCAATGTGTATGAAATGCTATGAAGACTGGCATGCAAGATCTCAGTCTTGTCCTTTCTGTCGAGACAGTCTCAAAAGAGTGAACACTGATGATCTTTGGATCTACATTAGCAGCAGTGAGATTAATGACTTGGCTTCAATCAACAAGGAGAATTTCAAAAGATTATTTATGTACATAGAAAGTTTGCCTCTCACAGCCAGACCCTATATGCACCATGCCATATATCATCACCACTAG 720 0.4056 MRKSFKDSLKALEADIQFANTLASEYPSGGACFQLRLSYSPAAQFFLFLVQWTDCHLAGALGFIRILIYKAYEDGKTTMSIYERKASLREFYGVVFPSLLQLHRGITDVDDRKQKHLCATKYKLKDLTSKGNLSEIDMERELECGICLEINSKVVLPNCNHSMCMKCYEDWHARSQSCPFCRDSLKRVNTDDLWIYISSSEINDLASINKENFKRLFMYIESLPLTARPYMHHAIYHHH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01376 239 SMART ring_2 144 181 IPR001841 -
Gma07g01376 239 PANTHER RING FINGER PROTEIN 41, 151 1 238 - -
Gma07g01376 239 SUPERFAMILY RING/U-box 133 187 - -
Gma07g01376 239 ProSitePatterns Zinc finger RING-type signature. 159 168 IPR017907 -
Gma07g01376 239 Pfam Zinc finger, C3HC4 type (RING finger) 141 187 - -
Gma07g01376 239 ProSiteProfiles Zinc finger RING-type profile. 144 182 IPR001841 -
Gma07g01376 239 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 238 - -
Gma07g01376 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 193 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01376 Gma-Chr7 18233462 18236880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01376 88 186 C3H Transcription Factor Family AT5G01960 29.524 1.87e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01376 K25840 - gmx:100818286 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01376 07 18233462 18236880 Gma07g01376 07 18233462 18236880 ECH
Gma18g01839 18 50924198 50927622 Gma07g01376 07 18233462 18236880 GST