Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01375 ATGGGGACAAGCAGTTTTCTATGGAACTGTACTAAAAAGTTTATCACAGCTGGGATTGTCACTGTGACTGTGACTGATCTTTTTGTGACAGTTATTCCAGTTCGAGGTGGATCTATGTCTCCCACATTTAATCCTAAAGCTGGTTCTCTGATGGGAGGTGTTTTTGATGACTATGTTTTGGTTGAGAAATTTTGCCTTCATAGCTACAAGTTTTCACATGGCGATGTGGTGGTCTTTCGCTCCCCACAAAATCACAAGGAGACACACGTAAAGAGAATAGCTGCATTACCTGGTGAATGGTTTGGCACTCATCAGAAGAATGATGTGATTCAGATTCCATTAGGACATTGTTGGGTTGAAGGAGACAACACAGCTTCTAGCCTGGATTCAAATTCATTTGGACCAATTCCTTTGGGCATAATTCGGGGAAGGGTTACCCATGTAGTGTGGCCTCCTCAAAGAATAGGAGCTGTCAAGAATACTCCACCACAGTTGGATCGACTACAGGAATAA 513 0.4269 MGTSSFLWNCTKKFITAGIVTVTVTDLFVTVIPVRGGSMSPTFNPKAGSLMGGVFDDYVLVEKFCLHSYKFSHGDVVVFRSPQNHKETHVKRIAALPGEWFGTHQKNDVIQIPLGHCWVEGDNTASSLDSNSFGPIPLGIIRGRVTHVVWPPQRIGAVKNTPPQLDRLQE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01375 170 CDD S26_SPase_I 34 145 IPR019533 GO:0004252|GO:0006465
Gma07g01375 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma07g01375 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma07g01375 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma07g01375 170 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 163 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Gma07g01375 170 Gene3D Umud Fragment, subunit A 24 165 - -
Gma07g01375 170 Pfam Signal peptidase, peptidase S26 105 150 IPR019533 GO:0004252|GO:0006465
Gma07g01375 170 Pfam Signal peptidase, peptidase S26 10 99 IPR019533 GO:0004252|GO:0006465
Gma07g01375 170 TIGRFAM sigpep_I_bact: signal peptidase I 16 105 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma07g01375 170 SUPERFAMILY LexA/Signal peptidase 28 168 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01375 Gma-Chr7 18226216 18229657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01375 39 162 MADS-box Gene Family AT1G29960 37.692 9.76e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01375 K09648 - gmx:100499932 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01375 07 18226216 18229657 Gma07g01375 07 18226216 18229657 ECH
Gma18g01838 18 50918697 50922400 Gma07g01375 07 18226216 18229657 GST