Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01372 ATGTTTTGCAATTGCTTTGGTGCTTTGAATCGATGTGGAAGGAGGGATGATTCTGAAGACCAGCCACATGAACAAGTGGTTGCAACTAAAATGTTTAGCTATAACTCATTGAGATCAGCAACAGGAGATTTTCATCCTTCAAGCAAAATCGGTGGAGGAGGCTATGGAGTTGTCTACAAGGGAGTTTTAAGGGATGGTACTCAAGCTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAGGGAACCCATGAATTTATGACAGAAATTGATATGATATCAAATATACGGCATCCAAATCTTGTGGAACTGATTGGCTGCTGTGTTGAGGGTAGTCACCGAATATTGGTTTATGAATTTTTGGAGAACAATAGCCTTGCGAGCTCTTTGCTTGGTTCAAAAAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGTTGCTATTTGTCGTGGCACGGCTTCTGGTCTAACTTTTCTTCATGATGAGGCACAACCAAACATTGTTCACAGGGATATCAAGGCCAGCAACATATTGTTGGATGGGAACTTCAATCCGAAAATTGGGGATTTTGGTCTGGCAAAACTTTTTCCTGATAATGTCACCCATGTTAGTACTCGAGTTGCAGGAACTGTGGGATATCTTGCCCCAGAATATGCACTTCTGGGGCAACTTACAAAGAAGGCAGACGTGTACAGTTTTGGGATTCTTATGCTTGAAATAATCAGTGGGAAAAGTAGTAGCATAGCTGCCTTTGAGGATGATTATTTGGTTTTGGTGGAATGGGCTTGGAAGCTGAGAGGAGAAAATAGGCTTTTGGACCTTGTTGATTCAGAACTAAGTGAATATGATGAGAGTGAGGTGTATAGGTTCCTCATAGTGGCTCTATTTTGCACCCAATCAGCCGCTCAACATAGACCAAGCATGAAGCAAGTATTGGAAATGCTTTGCAAGGAAGTTCATCTCAATGAGAAGGCATTGACTGAGCCCGGAATATACAGATGGCACAGCAATGGAAAGAGGGGTGGTTCTTTGAATGAGACATCATCTTCTCAAGCAATCAAGTACAAAAGAACCGAAAATCCACATGAAGCACCTTCAACTCACTTCAGTGGTACAGATATTGTGACAGAGATGCTTCCAAGATGA 1143 0.4191 MFCNCFGALNRCGRRDDSEDQPHEQVVATKMFSYNSLRSATGDFHPSSKIGGGGYGVVYKGVLRDGTQAAIKSLSVESKQGTHEFMTEIDMISNIRHPNLVELIGCCVEGSHRILVYEFLENNSLASSLLGSKSKYVALDWPKRVAICRGTASGLTFLHDEAQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSIAAFEDDYLVLVEWAWKLRGENRLLDLVDSELSEYDESEVYRFLIVALFCTQSAAQHRPSMKQVLEMLCKEVHLNEKALTEPGIYRWHSNGKRGGSLNETSSSQAIKYKRTENPHEAPSTHFSGTDIVTEMLPR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01372 380 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 365 - -
Gma07g01372 380 Gene3D Phosphorylase Kinase; domain 1 10 119 - -
Gma07g01372 380 SUPERFAMILY Protein kinase-like (PK-like) 23 314 IPR011009 -
Gma07g01372 380 Pfam Protein tyrosine and serine/threonine kinase 47 314 IPR001245 GO:0004672|GO:0006468
Gma07g01372 380 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Gma07g01372 380 SMART serkin_6 44 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01372 380 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Gma07g01372 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Gma07g01372 380 CDD STKc_IRAK 63 316 - -
Gma07g01372 380 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01372 380 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01372 Gma-Chr7 18181286 18187418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01372 32 329 Receptor kinase-like Gene Family AT1G56120 53.020 1.72e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma07g01372 PK_Tyr_Ser-Thr 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01372 - - gmx:100816683 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01372 07 18181286 18187418 Gma07g01372 07 18181286 18187418 ECH
Gma18g01833 18 50836890 50845378 Gma07g01372 07 18181286 18187418 GST