Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01362 ATGAGCTCCTCTTTCATCATCTCGAACGAGTCCTTTTCGTGGTTATCGACTCGGGATCAGCCACCGGTTATACAGAACAGCCGGTGGGCTAGCCTTCTTCTGGAGCTTCTTCGTGATGTTATTAATAGATTGGAAGCAAGCGAGAGTACATGGCCTGGTTGTAAGCATGTGGTTGCATGTGCTGCCATGTGCAAGTCCTGGAGAGAAATGTGCAAAGAAATTGTCAGCAGTCCTGAATTCTGTGGGAAGATTACTTTCCCTGTTTCCTTGAAGCAGCCTGGGCATAGGGATGGACCCATTCAGTGTTTCATCAAGAGAGACAAATCTAAGCTGACATACCACCTCTTCCTTTGCCTTAGTCCTGTCTTGCTTGTTGAAAATGGAAAGTTTCTTCTCTCTGCAAAACGGACAAGAAGAACAACTTGCACAAAGTATATTATATCAATGAATGCAGATAACATATCAAGATCTAGTAGTACTTACATTGGAAAACTGAGGATAAATGGCTTCCTCTCCACACTCTTGCTGCATGAATCCACATCCTTGATTGAGCACCAACTAGTCAAGCTGACAGAGCAATCACTTTTTCTCAAGAAAAGGACAAACCAAACAAAGCCCAGGCCTATAGTAGTGAGATTGGATGATGGAGATGTGGCACCAATTTCAGTCAAAAGACCAGAGCCAATGGATGATATTGTATTGAATTACAAGCAAGTGGGAATGAGAACATTATTGAAAGTATTCTCCTTAGTTGGCTCATGTTGGAGTATTCTCCCTTCTTCCTCTGTATCTTCTAATGGCTATGTGGTGTTATCATTATTGAAAGGTAAAAAAATCAAGGCGAAAAGCAAGAAAGACAATTGGCCAGGAGCATACTGTGACACAAAGCAGAGctgctgctatcctaagattgggaaacctgctgctatcctaagactgggaaacctgctATCTATCATATTTTGGTGCTAG 972 0.3961 MSSSFIISNESFSWLSTRDQPPVIQNSRWASLLLELLRDVINRLEASESTWPGCKHVVACAAMCKSWREMCKEIVSSPEFCGKITFPVSLKQPGHRDGPIQCFIKRDKSKLTYHLFLCLSPVLLVENGKFLLSAKRTRRTTCTKYIISMNADNISRSSSTYIGKLRINGFLSTLLLHESTSLIEHQLVKLTEQSLFLKKRTNQTKPRPIVVRLDDGDVAPISVKRPEPMDDIVLNYKQVGMRTLLKVFSLVGSCWSILPSSSVSSNGYVVLSLLKGKKIKAKSKKDNWPGAYCDTKQSCCYPKIGKPAAILRLGNLLSIIFWC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01362 323 PANTHER TUBBY-RELATED 16 173 - -
Gma07g01362 323 Pfam F-box domain 30 76 IPR001810 GO:0005515
Gma07g01362 323 Pfam Tub family 90 194 IPR000007 -
Gma07g01362 323 Gene3D Tubby Protein; Chain A 86 205 IPR025659 -
Gma07g01362 323 PANTHER TUBBY-LIKE F-BOX PROTEIN 1 16 173 - -
Gma07g01362 323 SUPERFAMILY Tubby C-terminal domain-like 78 216 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01362 Gma-Chr7 18084725 18088565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01362 23 210 TUB Transcription Factor Family AT1G76900 63.298 6.62e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Gma07g01362 Tub 1.3e-27 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01362 K19600 - gmx:100777316 352.058