Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01349 ATGGCTCGCATCCCAGACAAGATACATGACATAAATGGATCCAAAGAAACCCTGAAACTTGTTGTGAGGATAACTGATCTTTGGTTTGTGGGAACGCCTGACAAGCTTACCGAATTAGGCATTGAGGCCCACTCAGTTATGACACCTCACAGTCAAACAAGTTCACAACTTTCAGGTTCTAGCCAATTGTCAGCAAAGGATGCATTTTTTTTTTATAAAGTTAAGGCAAAGAGCCTTTCTGAGATTAACAACATGTCAGAGGAAATTGTTTGTGTAATAGTTGAGACCATTACCAAAATTGTCATGGAAAATCATTCATTGTGTTATGCAGCTTGCATCCATTGTTACAAGAAAACTGATGTAGACACTGCTCCCTTCACATGTGCATGTGGCAAATATAATCAGCAAGTTGTGCTTAGGTATAGACTTGAGGTCATGGTTAACCACAAGGAGGAATGCACGAAATTCTTGCTTTGGGACCATGAATGCACTGAGCTAATTGGTCAATTAGCTGACGAAGTTAATAGGTTAAAGATAGCAGATGGTGATGTTGATTTGAATGTTTCACCCGAAGTGCTTGATAAGCTCTTGGGATATTCACTTGCGTTTAAAGTTAAGGTTCAGCCAAAGTTCAAGAATTTTGTTGTTCTAAAATACTCATCTGACTTAGATTTGATTAAGACCATAGTAGACTTACTACCTGATGCTGAGGCATCTTACAAGACCGATATTCCACTCCCTGATTACAATGATCCTCCCAACTATGAGACTATGAGTGCAAAATTTGATGTTCCAATTTTTACCTCATATTTGTTGACATTGTGA 825 0.3855 MARIPDKIHDINGSKETLKLVVRITDLWFVGTPDKLTELGIEAHSVMTPHSQTSSQLSGSSQLSAKDAFFFYKVKAKSLSEINNMSEEIVCVIVETITKIVMENHSLCYAACIHCYKKTDVDTAPFTCACGKYNQQVVLRYRLEVMVNHKEECTKFLLWDHECTELIGQLADEVNRLKIADGDVDLNVSPEVLDKLLGYSLAFKVKVQPKFKNFVVLKYSSDLDLIKTIVDLLPDAEASYKTDIPLPDYNDPPNYETMSAKFDVPIFTSYLLTL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01349 274 Gene3D - 53 229 IPR012340 -
Gma07g01349 274 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 65 161 - -
Gma07g01349 274 Pfam Replication factor-A C terminal domain 102 208 IPR013955 -
Gma07g01349 274 PANTHER REPLICATION FACTOR A 1, RFA1 65 161 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma07g01349 274 SUPERFAMILY Nucleic acid-binding proteins 76 211 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01349 Gma-Chr7 17853925 17856217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01349 40 185 Core DNA Replication Machinery Family AT5G08020 26.351 1.39e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01349 - - gmx:106797678 327.791