Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01344 ATGAATAGGGGAATTGAAGTGCTCTCTCCAGCCTCCTATCTCCAAAGCTCCAATTGGTTGTTCCAGGAAAGCAAGGGAGCAAGGTGGACTGCAGAAGAGAACAAGTTGTTTGAGAATGCTTTGGCTTACTATGATAAGGACACCCCAGATAGATGGATGAGGGTGGCAGCCATGATTCCAGGGAAGACTGTTGGTGATGTGATCAAACAGTACAGGGAGCTTGAGGAAGATGTGGGTGTCATTGAAGCAGGTTTGATTCCAGTTCCTGGCTATACTACTGCCAGTTCTTTCACATTGGAGCCAACAGAGCAGGAAAGGAAGAAAGGGGTGCCATGGACTGAAGAGGAGCACAGACAATTTCTGCTGGGTCTCAAGAAGTATGGTAAAGGGGATTGGAGAAACATCTCTAGGAACTTTGTGATCACAAGGACACCAACTCAGGTTGCAAGTCATGCTCAGAAGTACTTCATCAGGCAACTTACAGGAGGGAAGGATAAGAGGAGATCCAGTATCCATGACATCACAATGGTCAATCTCCAAGAAACAAAATCTGCTTCATCAGACACTACCAAACCCTCTTCTCCACTTCAGAACCAGAAATTGTCTAGCATGGTTAAGCAAGAATATGAGTGGAAATTGCCGTGTGAAGGCATGCCAATTGTTTTCAATTCCACAAGTGGAAACATGTTCATGTCTGCACCATTGCATGGCATTTCTTCATATGAATCTAGACCACAGGAGCAAAATTTACTTAGACAATCTTCATGGATGCCAGTTTTCACCTTGTGA 789 0.4461 MNRGIEVLSPASYLQSSNWLFQESKGARWTAEENKLFENALAYYDKDTPDRWMRVAAMIPGKTVGDVIKQYRELEEDVGVIEAGLIPVPGYTTASSFTLEPTEQERKKGVPWTEEEHRQFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLQETKSASSDTTKPSSPLQNQKLSSMVKQEYEWKLPCEGMPIVFNSTSGNMFMSAPLHGISSYESRPQEQNLLRQSSWMPVFTL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01344 262 ProSiteProfiles SANT domain profile. 112 160 IPR017884 -
Gma07g01344 262 SUPERFAMILY Homeodomain-like 28 81 IPR009057 -
Gma07g01344 262 Gene3D - 110 160 - -
Gma07g01344 262 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 6 253 IPR043363 -
Gma07g01344 262 CDD SANT 111 156 IPR001005 -
Gma07g01344 262 MobiDBLite consensus disorder prediction 180 199 - -
Gma07g01344 262 CDD SANT 28 74 IPR001005 -
Gma07g01344 262 Gene3D - 21 88 - -
Gma07g01344 262 ProSiteProfiles Myb-like domain profile. 104 156 IPR001005 -
Gma07g01344 262 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 6 253 - -
Gma07g01344 262 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 107 159 IPR006447 GO:0003677
Gma07g01344 262 SUPERFAMILY Homeodomain-like 105 159 IPR009057 -
Gma07g01344 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 160 IPR017930 -
Gma07g01344 262 SMART sant 108 158 IPR001005 -
Gma07g01344 262 SMART sant 25 77 IPR001005 -
Gma07g01344 262 Pfam Myb-like DNA-binding domain 111 156 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01344 Gma-Chr7 17814718 17816114 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma07g01344 Myb_DNA-binding 4.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01344 - - gmx:100775697 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01344 07 17814718 17816114 Gma18g00282 18 2354988 2357044 ECH
Gma07g01344 07 17814718 17816114 Gma11g02292 11 38282740 38285188 ECH
Gma07g01344 07 17814718 17816114 Gma07g01344 07 17814718 17816114 ECH
Gma07g01344 07 17814718 17816114 Gma18g00613 18 6014645 6017075 ECH
Gma18g01813 18 50365264 50368004 Gma07g01344 07 17814718 17816114 GST