Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01327 ATGATAGTTGCTGTGGATTTGAATGCCTCACCTGTGCCAGAGGACGATGAAGATGATTTTGGCCGCCAGGTTGAAGAGTACCGTACACCAGAAGAGCGTGTGGAATCTGCAGTTGATATTGCTCACCAGGAATGTGAAGAAAGAAAAAGAAAGTTGAAAAGAGAACATTCAGATGACAAACCTGTGCAAGTATCACAATCACCTGGACATGATCAGTTATTTCATACTAAGATTCTTAAATCATATGATAGAAGTAAGCTTCCTCCCGGTTGGTTGGATTGCCCTTCATTTGGCCAGGAAATTTATTGCATGATACCATCCAAGGTTCCACTTGGTGAATCATTCAATGATGACATCATTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAGCTTGATCTGGTAATTGATTTGACGAATACTTCTCGATACTATTCAGTAGCAGATTTAAAGAAAGAGGGTATCAAGTATGTTAAGATTCAATGCAAGGGCCGTGATTCTGTACCTGATAATTTATCTGTTAATCATTTTGTCTATGAGGTTATGCAATTTCTATTACGTCAAAAACACTCGAGGAAGCATATACTTGTTCATTGTACACATGGTCATAATCGTACAGGATACATGATCATCCATTATCTGATGCGCTCAATGTCAATGTCTGTTACTCAGGCAATAAAAATATTTTCTGATGCACGCCCTCCGGGAATCTATAAACCTGAGTACATTGATGCATTGTATGCATTTTATCATGAAAAAAAGCCTGAAATGATAGTTTGTCCTCCTACCCCCGAGTGGAAGAGAACTCCTGAACTTGTTGATCTAAATGGTGAAGCAATGCCAGATGATGATGATGATGGAGTACCAGGCTCTCCTTTGCATGAGAATCATGTGACTGACACTATAATGAGAAATGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAAGATGCATTTCGTCAGTTCTGCTTTCGAACACTCAAACTAGGTGTTGGGGCCAGAGGGCACATGCAATTTCCAGGGTCACACCCAGTTTCTTTAAACAGGGAGAATTTACAACTGTTACGACAACGTTATTATTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGACGGATGTTACTTGATTGATAGAAGCTTCAATTTTCGAAGGGTTCAAATGAGGTTTCCTTGCAGGATTACAAAGGATGGCATGGCTGAGAAGACACACCACTTCACATTGCTTGATGGGGAGATGATTATTGATACATTGCCAGATTCCAAAAAGCAGGAAAGGAGATACCTCATATATGATCTGATGGCAATCAATGGAGTATCAGTAATAGAGCGACCATTTTATGAACGGTGGAAGATGCTAGAGAAAGTTATTGAACCCAGGAATCAGGAACGGTTCCAGAGTAGAAATCCTTACTATAGATATGACATGGAGCCATTCCGGGTGAGGAGAAAAGATTTTTGGCTGCTCTCTACTGTCACAAAGCTTTTAAGCGAATTCATTCCGAAACTCTCACATGATGCAGATGGTCTCATATTTCAGGGATGGGATGATCCTTACATACCTCGCACTCACGAAGGCCTCTTGAAGTGGAAATATGCTGAGCTGAATTCAGTTGATTTTCTCTTTGAGATTGATAACGATTGTCAGCTACTTCTTCTGTATGAACGTGGAAAAAGGAAGCTCTTGGAAGGCTATAGGGTTGCATTTGAAGGTTTGGATCCCTTGCATTATTCCGGAAAGATCATTGAGTGTTCTTGGGATTCTGACAGACAGGAATGGATATTCAAGCGAATCAGAACAGATAAATCAACACCAAATGACTTTAATACTTATAGAAAGGTGATGCGAAGTATAAGAGACAATATCACAGAGGATGTCCTGTTGAATGAAATAAATGAGATAATTTGCCTTCCCTTGTATGCAGACAGGATAAGAATTGATAGCAAAGCCCATATCCACACCAATATGGCACGGCGAAGGTAA 2034 0.3972 MIVAVDLNASPVPEDDEDDFGRQVEEYRTPEERVESAVDIAHQECEERKRKLKREHSDDKPVQVSQSPGHDQLFHTKILKSYDRSKLPPGWLDCPSFGQEIYCMIPSKVPLGESFNDDIIPGKRYSFKQVIHQQRVLGRKLDLVIDLTNTSRYYSVADLKKEGIKYVKIQCKGRDSVPDNLSVNHFVYEVMQFLLRQKHSRKHILVHCTHGHNRTGYMIIHYLMRSMSMSVTQAIKIFSDARPPGIYKPEYIDALYAFYHEKKPEMIVCPPTPEWKRTPELVDLNGEAMPDDDDDGVPGSPLHENHVTDTIMRNDDVLGDEIPNDQQDAFRQFCFRTLKLGVGARGHMQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRITKDGMAEKTHHFTLLDGEMIIDTLPDSKKQERRYLIYDLMAINGVSVIERPFYERWKMLEKVIEPRNQERFQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLSEFIPKLSHDADGLIFQGWDDPYIPRTHEGLLKWKYAELNSVDFLFEIDNDCQLLLLYERGKRKLLEGYRVAFEGLDPLHYSGKIIECSWDSDRQEWIFKRIRTDKSTPNDFNTYRKVMRSIRDNITEDVLLNEINEIICLPLYADRIRIDSKAHIHTNMARRR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01327 677 Gene3D - 588 652 IPR012340 -
Gma07g01327 677 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 313 549 - -
Gma07g01327 677 ProSiteProfiles ATP-dependent DNA ligase family profile. 436 576 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Gma07g01327 677 CDD Adenylation_mRNA_capping 342 549 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gma07g01327 677 Pfam mRNA capping enzyme, catalytic domain 354 548 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gma07g01327 677 PANTHER MRNA-CAPPING ENZYME 3 677 - -
Gma07g01327 677 MobiDBLite consensus disorder prediction 46 68 - -
Gma07g01327 677 Pfam Dual specificity phosphatase, catalytic domain 139 259 IPR000340 GO:0008138|GO:0016311
Gma07g01327 677 Pfam mRNA capping enzyme, C-terminal domain 553 645 IPR013846 -
Gma07g01327 677 Gene3D Protein tyrosine phosphatase superfamily 83 295 IPR029021 -
Gma07g01327 677 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 265 IPR020422 GO:0006470|GO:0008138
Gma07g01327 677 PIRSF mRNA_capping_HCE 74 677 IPR017074 GO:0004484|GO:0006370|GO:0140818
Gma07g01327 677 MobiDBLite consensus disorder prediction 1 21 - -
Gma07g01327 677 SMART dsp_5 121 261 IPR020422 GO:0006470|GO:0008138
Gma07g01327 677 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Gma07g01327 677 CDD RNA_5'-triphosphatase 90 256 - -
Gma07g01327 677 MobiDBLite consensus disorder prediction 46 61 - -
Gma07g01327 677 Gene3D DNA ligase/mRNA capping enzyme 313 548 - -
Gma07g01327 677 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 677 - -
Gma07g01327 677 SUPERFAMILY Nucleic acid-binding proteins 551 659 IPR012340 -
Gma07g01327 677 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 276 IPR029021 -
Gma07g01327 677 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 253 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01327 Gma-Chr7 17516859 17528384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01327 1 677 Protein tyrosine phosphatase (PTP) family AT3G09100 67.737 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01327 K13917 - gmx:100818110 1361.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01327 07 17516859 17528384 Gma07g01327 07 17516859 17528384 ECH