Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01325 ATGGACGCCTGGTGTGATGATCGAATCCAGAAGATTCAAACAATAAAAATGATGGAAGGAATCCTCATTTGTGCAGCTCCTCACTGTCTCAAGTCTTTCTTGAAGAAAGCTGATTTTGAATCTCATATCCAAGACAGCCATGCCAGCCTTCTTCGACCCAATGCAGATAAAGAAGACGGAAATGAGTCGGAGGCACAGAGTGTTAGGCAATCGACAGCCTCAGATTCCACTGCTCGAGGTCCCCAAAGACCAGTATTTTCTCCTGGTTCAAATTCCCAGCAACATGATCTGGAAGAGAAATCTCGTAGACAGACACCTAGAGAGCAACCACCTTCAAGGCAAACCATGCAGCCAAAGCCACCATATTATAGTCAACAACAACACCCTTCGGATACCATGTCTGGCTCTGTTGGAGGTGGACAACAGGGCTTTCATCAACAAAGTTTTGACATACAGCATCCCCCACAAGAATCTTCCCAGTTTGCTGACAGACAACAAGCAGTTGGTCCAGAGACCCCATTTCCTGAGTATCCAACAATGCACCCAGCACAACCTTCCAATGTTCCCTCACTGGTTACTTCAAACCCAATGCTGAACCCTCCCATGCCATTTGGTTATCCCCCATACCCAAACGAGCGAGCTCAGCCATTTTATGGTGCTCCATATGATATGCCTAGGCAGGACTCGGGTTCTGATATAGGTGGGGACCAAAGTTCATTACTGGGTTTCCCACAAGGTGTCCCAAGTGGCCCAAATTTTCCAGGAAATTATCTCCAGCCCTGGAATTCAGGAATGGGTGGTGTGCCTTTTGAACAAGCGCAGGGTGGTATGGTCGTGGATCCAAGGGAGGGCAAAGGTATATTGGCACCACAGCCCATGCCCCTCCCACCGCCACCTCCACCTCCATCCCACATGTCACATGGGAAACAGAACTACTATTCTGGGGAGGTTGGGCATGATGGTCAGGGTTATGGGTGGCAGCATGATAACCGTGATAACTTTGGTAACCAAGTCTAG 1017 0.4867 MDAWCDDRIQKIQTIKMMEGILICAAPHCLKSFLKKADFESHIQDSHASLLRPNADKEDGNESEAQSVRQSTASDSTARGPQRPVFSPGSNSQQHDLEEKSRRQTPREQPPSRQTMQPKPPYYSQQQHPSDTMSGSVGGGQQGFHQQSFDIQHPPQESSQFADRQQAVGPETPFPEYPTMHPAQPSNVPSLVTSNPMLNPPMPFGYPPYPNERAQPFYGAPYDMPRQDSGSDIGGDQSSLLGFPQGVPSGPNFPGNYLQPWNSGMGGVPFEQAQGGMVVDPREGKGILAPQPMPLPPPPPPPSHMSHGKQNYYSGEVGHDGQGYGWQHDNRDNFGNQV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01325 338 MobiDBLite consensus disorder prediction 65 94 - -
Gma07g01325 338 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 5 312 - -
Gma07g01325 338 MobiDBLite consensus disorder prediction 291 338 - -
Gma07g01325 338 MobiDBLite consensus disorder prediction 108 166 - -
Gma07g01325 338 MobiDBLite consensus disorder prediction 291 305 - -
Gma07g01325 338 MobiDBLite consensus disorder prediction 51 173 - -
Gma07g01325 338 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 5 312 IPR040383 GO:0016567|GO:0061630
Gma07g01325 338 ProSitePatterns Zinc finger C2H2 type domain signature. 24 47 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01325 Gma-Chr7 17503225 17507781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01325 4 337 C2H2 Transcription Factor Family AT5G01160 37.249 8.51e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01325 K15685 - gmx:100817582 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01325 07 17503225 17507781 Gma07g01325 07 17503225 17507781 ECH
Gma18g01798 18 49990783 49994559 Gma07g01325 07 17503225 17507781 GST