Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01273 ATGGACCAACTTAACATTGCAATGCTAATATTCACAACTATAGCATTGTTTCTATCACGTGCCGAGGCCATGCGTAAGTGCGGGAATTGCGGTTTGAACCCGGTTCCGTATCCGTTAAGCACTGGACCCGATTGTGGTGACCCGTGGTACAAGATTCGGTGCACCGCGGGTACACTGTGGTTGGATGCACTCGCCGGGTCAGCCTACATGATCAGCTCCATTGACCCGTTAACCCGTAGTATCATAACCCGACCCGCTTCAATTACACCAAAGACATGCGTGTCCACGGACTTCCACAGCGAAGGCATGCACCTGAACGAAACCCTTCCTTTCAGTGTGGCTTCAGGAAACACCGTTTTTCTCTTCAACTGCACCACCCACGCGCCTTCGATGAACTGCGCCGCAAGCGGCACGTGCCACAGGTATGTTAAGGAGCACGCGGATTTCGGCGCGTGCGGGCGCGTGGGAGTGTGCTGCGAGTACAAGAGTGCTGGATCCCTCAAAGAATATGTGGTTCGGGTACACGGCGGAGGATGCGCGGCGTATCAGAGTTTTGTGGATTTTAACGGCACGGCGGCGGGAAAGCGGTGGCCGGAGCCTGGGGTAGGGATCAAGTGGGTGGCACCACAGGAACCGGTTTGTAAGGCGCCAATAGATTGCAAGGAATTGTTGAACTCGAAATGTGGAGTGGGCCCCGCTGGTGGTGTTGTGCAAAGGTGCTTGTGCAATGTTGGGTTTAAGTGGGACCCGATCAATGGTTCGTGTCAACCTCAAGCCCAGACACAGAATACAAAGGGCAAAGGACATGGAAAAGATAGCAACGGCAAAGTTCGGAAGAAAAAGAAAATGCTTCTGGCTGTGGTTGCTTCCTTAGGAGGAATATTCTCTATTGTAACAGTTATAGGAGTCATTTTCTACAAGAAGCATAATCAAGCAAAGCAGGCCAAAATCAAAAAGAGGAAAGAAATCTCAAGTGCCAAAGCCAATGCTTTATCATCAAGAATCTTCACTGGTAGAGAGATAAGAAAAGCAACCAACAATTTCTCCCAAGAAAACCTCGTTGGCACTGGTGGCTTTGGTGAAGTCTTCAAGGGAACATTTGACGATGGAACCGTCTTTGCCATCAAACGTGCCAAGCTTGGATGCACCAAAGGCATTGATCAAATGCAAAACGAGGTCCGAATTCTCTGCCAAGTAAACCACAGAAGCCTAGTTAGACTCCTTGGTTGTTGCTTGGAACTTGAAAACCCTTTGCTAATATACGAGTACGTCTCAAATGGGACCCTTTTCGACTACCTTCATCGCTACTCTTCTGGCTCTAGGGAACCCCTCAAATGGCATCAAAGACTCAAAATTGCACACCAAACAGCTGAAGGGCTTTGCTATCTGCATTCAGCAGCCGTGCCACCAATTTACCACCGCGACGtgaaatcaagcaacatacttcttgatgacaagcttgatgcaaaagtttctgattttgggctatctaggcttgttgaattggctgaagagaacaagagccatattttcactagtgctcaagggacactggggtatctagaccccgagtattatcgtaactttcagttgacggataagagcgatgtttatagctttggagtggtgttgatggagttgCTCACTGCTCAGAAGGCTATTGATTTCAATAGGGAAGAAGAGAGTGTGAACTTGGCCATGTATGGGAAGAGGAAAATGGTTGAGGACAAGTTGATGGATGTGGTTGATCCTCTGCTTAAAGAGGGAGCTAGTGCGTTGGAATTGGAAACTATGAAGTCATTGGGGTATCTTGCAACTGCATGCGTGGATGACCAGAGGCAAAAACGGCCTTCAATGAAAGAAGTAGCTGATGATATTGAATATATGATTAAAATTGTTAAGGGTCAGGAAAGATTACTCGAGGCTAGCTTCTTTCATGAACCAAATGGGGGTTACTTACCGGAGGATGAATTGTGGGATGGTGATATATGA 1992 0.4307 MDQLNIAMLIFTTIALFLSRAEAMRKCGNCGLNPVPYPLSTGPDCGDPWYKIRCTAGTLWLDALAGSAYMISSIDPLTRSIITRPASITPKTCVSTDFHSEGMHLNETLPFSVASGNTVFLFNCTTHAPSMNCAASGTCHRYVKEHADFGACGRVGVCCEYKSAGSLKEYVVRVHGGGCAAYQSFVDFNGTAAGKRWPEPGVGIKWVAPQEPVCKAPIDCKELLNSKCGVGPAGGVVQRCLCNVGFKWDPINGSCQPQAQTQNTKGKGHGKDSNGKVRKKKKMLLAVVASLGGIFSIVTVIGVIFYKKHNQAKQAKIKKRKEISSAKANALSSRIFTGREIRKATNNFSQENLVGTGGFGEVFKGTFDDGTVFAIKRAKLGCTKGIDQMQNEVRILCQVNHRSLVRLLGCCLELENPLLIYEYVSNGTLFDYLHRYSSGSREPLKWHQRLKIAHQTAEGLCYLHSAAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEDKLMDVVDPLLKEGASALELETMKSLGYLATACVDDQRQKRPSMKEVADDIEYMIKIVKGQERLLEASFFHEPNGGYLPEDELWDGDI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01273 663 Gene3D Phosphorylase Kinase; domain 1 306 423 - -
Gma07g01273 663 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 16 635 - -
Gma07g01273 663 Pfam Protein tyrosine and serine/threonine kinase 351 625 IPR001245 GO:0004672|GO:0006468
Gma07g01273 663 Gene3D Transferase(Phosphotransferase) domain 1 424 641 - -
Gma07g01273 663 ProSiteProfiles Protein kinase domain profile. 348 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01273 663 SUPERFAMILY Protein kinase-like (PK-like) 323 626 IPR011009 -
Gma07g01273 663 MobiDBLite consensus disorder prediction 257 277 - -
Gma07g01273 663 SMART serkin_6 348 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01273 663 CDD STKc_IRAK 354 627 - -
Gma07g01273 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gma07g01273 663 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Gma07g01273 663 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 635 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01273 Gma-Chr7 16586947 16591211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01273 26 633 Receptor kinase-like Gene Family AT5G02070 54.153 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma07g01273 PK_Tyr_Ser-Thr 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01273 - - aprc:113862410 1038.1