Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01272 ATGAGGATCTTAAATCTCTCTCTTTTGGTCCTCACATTTACCATTTCCCTATCTTCCTTCTCATTTGTCAATGCTTTCAAACGTTGTCCAAATTGTGGCCAAACTAGAGTGCCATACCCATTGAGCACTGCCCCAAACTGTGGTGACCCATCCTACAAGATTCGTTGCACTGGAGGAACACTCTTCTTCGACTCCATCAATGGTTTCTCTTATGCGATCACCGCCATCAACCCCACTACGCAGCGTTTCATTCTCCACCCATCAGGTTTCTTAAACAACACGTGCATGTCCACCGATTTCCCAAACGAAGGGATTTGGCTCGACACCAACTCCCCCTTCAACATTACCTCCAGCAACACGGTGGTCCTCTTAAACTGCTCCAACAACGTCTTTACCACACCGCGGAACTGCTCGTTATCGAGCATTTGCCACAAGTATGTGAAAGAAAATGATGTGGCAGCAAAAATATGCGGGGCACGGAGTCATACCCCGCAGACATGCTGCCACATCAAAACTGGTGGGTCTGTCACTGCTTATAGGATAAGGGTGAGGAAGGAACGGTGTTCCGCGTATTTTAGCTTTCCCAATTTGGATCCTTCTTTGCCGGTGAGTATGTGGCGGCCAGGGGTGGAACTAGAGTGGGAGTTGCCGGAGGAGCCGTCGTGCAGAGTTAATGAAGATTGCTTGGATTTGGAAAACTCCGTTTGTTCGCCGAATCCGATGATCGGTGGATCGAGGAAGTGCATGTGCAAGCGTGGCTATGAATGGGATTCTGTAAACGGAATATGTCAAAGTAACAAGTGTGAACATGGAAGAGGATGCAAGCGTTGTAACAAGAAAACTTCGCTTATCGGAGGCACAACATTGTTAGCAATCGCCACGCTAACAACGGCCATGATCACAACATTGGTGTTATACCTTCGTAGGCAAAGGATCAAAGGAGAAACCGAACAAAGCCTAAGCAGGGCACGCGACATATTAAACGCAAACAATAGTGGCGGCAGATCCGCAAAGATCTTCACCATGAAAGAGCTCACAAAGGCAACAAGCAACTTCTCCAAAGCCAACCTCCTAGGTTTCGGCGGCTTCGGCGAGGTCTTCAAAGGAACCCTAGACGACGGAACCATCACAGCCATCAAGAGAGCCAAACCCGGCAACATAAGAGGCATAGACCAAATCCTAAACGAGGTCAAAATCCTCTGCCAAGTCAACCACAGAAGCCTCGTGAGACTGTTAGGGTGTTGTGTTGAACTTCCCGAGCCCCTTCTTGTGTACGAATACGTCCCCAATGGAACCCTTTTCGAGCACCTTCACCACCACCACCACAACAACAACTCTAGTAAAGGGATTCGACTCGGGTGGCATTCGAGATTGCGAATCGCGCACCAAACCGCTGAAGGAATTGCATATCTTCACAATGCAGCTGTGCCAAGAATTTACCATAGAGATATAAAATCTAGTAACATTCTTTTGGATGATAACCTTGATGCCAAGGTTTCTGACTTTGGTCTTTCTAGGTTGGTTGTGAGTGATGCAACACACATAACCACGTGTGCTAAGGGGACATTAGGGTATCTTGACCCGGAATACTATGTGAACTTTCAGCTCACGGATAAGAGTGATGTGTATAGCTTTGGCGTGGTTTTGTTGGAGCTTTTGACTTCGAAGAAGGCGATTGATTTCAATAGGGAAGAGGAGGATGTGAACTTGGTGGTTTTGATTAAGAGGGCTTTGAGGGAAGGGAGGTTGATGGATAATGTTGATCCTATGCTGAAGAGTGGTGATAGTAGGTTGGAGTTGGAAAGTATGAAGGCGTTTGGGGCTCTTGCTATTGCGTGCTTGGATGATCGAAGGAAGAATAGACCTACGATGAAAGATATTGCTGATGAGATTGAGTGCATTATTGGCATTCTTGTTGGTGCTAAGGTTGATGGTTTGGAGGTTTAG 1947 0.4694 MRILNLSLLVLTFTISLSSFSFVNAFKRCPNCGQTRVPYPLSTAPNCGDPSYKIRCTGGTLFFDSINGFSYAITAINPTTQRFILHPSGFLNNTCMSTDFPNEGIWLDTNSPFNITSSNTVVLLNCSNNVFTTPRNCSLSSICHKYVKENDVAAKICGARSHTPQTCCHIKTGGSVTAYRIRVRKERCSAYFSFPNLDPSLPVSMWRPGVELEWELPEEPSCRVNEDCLDLENSVCSPNPMIGGSRKCMCKRGYEWDSVNGICQSNKCEHGRGCKRCNKKTSLIGGTTLLAIATLTTAMITTLVLYLRRQRIKGETEQSLSRARDILNANNSGGRSAKIFTMKELTKATSNFSKANLLGFGGFGEVFKGTLDDGTITAIKRAKPGNIRGIDQILNEVKILCQVNHRSLVRLLGCCVELPEPLLVYEYVPNGTLFEHLHHHHHNNNSSKGIRLGWHSRLRIAHQTAEGIAYLHNAAVPRIYHRDIKSSNILLDDNLDAKVSDFGLSRLVVSDATHITTCAKGTLGYLDPEYYVNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEEDVNLVVLIKRALREGRLMDNVDPMLKSGDSRLELESMKAFGALAIACLDDRRKNRPTMKDIADEIECIIGILVGAKVDGLEV 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01272 648 CDD STKc_IRAK 358 632 - -
Gma07g01272 648 Gene3D Transferase(Phosphotransferase) domain 1 428 637 - -
Gma07g01272 648 ProSiteProfiles Protein kinase domain profile. 352 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01272 648 SUPERFAMILY Protein kinase-like (PK-like) 336 629 IPR011009 -
Gma07g01272 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 637 IPR045274 GO:0007166
Gma07g01272 648 Pfam Protein kinase domain 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01272 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15 28 637 - -
Gma07g01272 648 Gene3D Phosphorylase Kinase; domain 1 325 427 - -
Gma07g01272 648 SMART serkin_6 352 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01272 648 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Gma07g01272 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01272 Gma-Chr7 16568026 16573715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01272 28 638 Receptor kinase-like Gene Family AT5G02070 53.933 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma07g01272 Pkinase 7.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01272 - - gmx:100775709 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01272 07 16568026 16573715 Gma07g01272 07 16568026 16573715 ECH
Gma18g01721 18 48066488 48075486 Gma07g01272 07 16568026 16573715 GST