Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01266 ATGGAGGAGGATCAATGTTGGATCAAGAGTAGGAGAAAGTACTCAATGAGCTCTAATCTTGACTCATCTACTAATTACCCCTCCTCCTATGATGACCACTCATCATGGGAAGAACAAGCCTTCGCAAAAGATGCAGCTAGGTCTGGTTGCACATGGCCACCTCGATCATATTCTTGTAGCTTTTGCAGAAGGGAATTTAGGTCAGCACAGGCTTTAGGCGGCCATATGAATGTTCATAGAAGAGATAGGGCAAGACTCAAGCAGCCATATAGCCCTCAGAATGAAATCCTAAGTGTTGATCTTGAGAAAATTACCACGCAACCCCTGAATTCAGTTCAGATTTCTTTTACTTCTTTGGGTTACTTATACCCATCTTCTCTTGGTGTATTGACCCATAATAACACTAACCCTAATTCTGATCCTTATTCTCATGCTCCTCCTTCACCTTCCAAGGTTTTAGTCTCATCAATCAATAAGAGAGGAAGAGAGAAACCCCAGATTCCGCTTTACAAAGGATGTCATGAGTCTTCTCCTGATCTTCCTTCTAAATCCATGTCAAATTTAACTGAAGACTTCAGATTTTGTTCACGTAGGCTCGATCCTGAAGCTGGTGTTGAGAAAAAATTGAAGGGATTGGATTCTAGGTGTGGGAGTACTGAGGGAGATGATGATAAAACGGACGTGGCTGTGAGCTTGAACTTGTTTATGAATCTAGCTCGCCCAACTGTGCAGTTTGAGACTAAGGAGAAAGATACAAGTTTCAAGAAGAGGAAAGAAGATGCTTCATCCATTCCATTCTTCCCCAAATCATGCTCTGTTGATAGGCTTCATATGCAGTCAAAGATGTTTGAATTGAGCCCTAGTTCCATAGAAGAGCTAGATCTGGAGCTAAGGCTTGGTTATAGGTCCATGGTATAG 918 0.4205 MEEDQCWIKSRRKYSMSSNLDSSTNYPSSYDDHSSWEEQAFAKDAARSGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQPYSPQNEILSVDLEKITTQPLNSVQISFTSLGYLYPSSLGVLTHNNTNPNSDPYSHAPPSPSKVLVSSINKRGREKPQIPLYKGCHESSPDLPSKSMSNLTEDFRFCSRRLDPEAGVEKKLKGLDSRCGSTEGDDDKTDVAVSLNLFMNLARPTVQFETKEKDTSFKKRKEDASSIPFFPKSCSVDRLHMQSKMFELSPSSIEELDLELRLGYRSMV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01266 305 PANTHER OS07G0101800 PROTEIN 1 304 - -
Gma07g01266 305 Gene3D Classic Zinc Finger 44 107 - -
Gma07g01266 305 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Gma07g01266 305 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
Gma07g01266 305 SMART c2h2final6 57 79 IPR013087 -
Gma07g01266 305 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 304 - -
Gma07g01266 305 MobiDBLite consensus disorder prediction 134 153 - -
Gma07g01266 305 Pfam C2H2-type zinc finger 57 81 - -
Gma07g01266 305 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01266 Gma-Chr7 16428585 16429977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01266 27 88 C2H2 Transcription Factor Family AT2G37740 75.806 3.75e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma07g01266 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01266 - - gmx:100810800 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01266 07 16428585 16429977 Gma02g02363 02 49699357 49700217 ECH
Gma07g01266 07 16428585 16429977 Gma14g00571 14 5467698 5468531 ECH
Gma07g01266 07 16428585 16429977 Gma07g01266 07 16428585 16429977 ECH
Gma18g01704 18 47668065 47669949 Gma07g01266 07 16428585 16429977 GST