Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01265 ATGGAGTTCAATTCCCAAAACCCTAACCAATCTGAGATAAGATGGAGCTCAGATGATCAGGCTGGTCCTGGACAAGTAAAATATTCTTGTTCCTTTTGCCAAAGAGGGTTCTCAAATGCACAGGCCCTAGGAGGCCACATGAATATCCATAGAAGAGATAGGGCTAAACTCAAACAATCTGCTGAGGAAAAGTTGCTTTCTTTGGACATCTCAATCAAAACCACTGGCGATCCAAATGACCCTTCTGATTTGGAAGAGAAATTTTTGTTTCGGCTGGGTGCTGGTGAAGAGAAGCAAGCAAGAAACCATAAATATCCATTCAGTTTTCCTCACAAAGATGATCATCATGGTCATGTTCCACAAATTCCCCATCTGCCTTCTTTTGAGGAGAAGACAGCTGAATTAGACCTCGAGCTGAGGTTAGGGCTTCATCCTCAGGAGTCAGCAACATTGAACACTAGATCGTTCTTTTGA 474 0.4283 MEFNSQNPNQSEIRWSSDDQAGPGQVKYSCSFCQRGFSNAQALGGHMNIHRRDRAKLKQSAEEKLLSLDISIKTTGDPNDPSDLEEKFLFRLGAGEEKQARNHKYPFSFPHKDDHHGHVPQIPHLPSFEEKTAELDLELRLGLHPQESATLNTRSFF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01265 157 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Gma07g01265 157 PANTHER OS07G0101800 PROTEIN 1 62 - -
Gma07g01265 157 PANTHER OS07G0101800 PROTEIN 67 147 - -
Gma07g01265 157 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 67 147 - -
Gma07g01265 157 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 62 - -
Gma07g01265 157 SUPERFAMILY beta-beta-alpha zinc fingers 25 54 IPR036236 -
Gma07g01265 157 SMART c2h2final6 28 50 IPR013087 -
Gma07g01265 157 MobiDBLite consensus disorder prediction 1 22 - -
Gma07g01265 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Gma07g01265 157 Gene3D Classic Zinc Finger 12 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01265 Gma-Chr7 16409246 16409719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01265 15 150 C2H2 Transcription Factor Family AT3G53820 38.971 1.65e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma07g01265 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01265 - - gmx:100101897 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01703 18 47637898 47638401 Gma07g01265 07 16409246 16409719 GST