Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01254 ATGGACGAGGACGCACCTCCTCAAAAAAGACTCAAAGCACCAGAAGTTGCAATTAAGGTTCAAATGCAGGGGATTGCAGTCGTTCGTGCTGTGAATTTGACCACATTGGATGGGTATGATCAACTTGTAGATGAATTGGAGAAGATGTTTGACATAAAGGGACAACTTCAAAACAAGAATAAGTGGGTAGTTCTCTACGCTGATGATGATGGAGATACGATTCTTGTTGGTGATGAGCCATGGCCTGAATTCTGTCAAGTGGTGAGAAGAATCTTAATTTGTTCTAGTCAGGCTGTGCACTATTGA 306 0.4216 MDEDAPPQKRLKAPEVAIKVQMQGIAVVRAVNLTTLDGYDQLVDELEKMFDIKGQLQNKNKWVVLYADDDGDTILVGDEPWPEFCQVVRRILICSSQAVHY 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01254 101 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 101 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma07g01254 101 Pfam AUX/IAA family 56 94 IPR033389 -
Gma07g01254 101 Pfam AUX/IAA family 13 51 IPR033389 -
Gma07g01254 101 Gene3D - 12 100 - -
Gma07g01254 101 PANTHER AUXIN RESPONSE FACTOR 16 101 - -
Gma07g01254 101 ProSiteProfiles PB1 domain profile. 15 96 IPR000270 GO:0005515
Gma07g01254 101 SUPERFAMILY CAD & PB1 domains 14 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01254 Gma-Chr7 16340301 16341373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01254 9 99 B3 DNA Binding Superfamily AT1G34410 54.945 7.68e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma07g01254 AUX_IAA 3.9e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01254 K14486 - gmx:102665969 208.379