Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01247 ATGAGACCCAAAGCCACACCCACCATCCCATATCTCAAGTTCATCATTTTCTTCATCATAGAAGCACCCATTGGCATCTTCTTCAATAACCATTGTGAAGCCAAGACCTTAGCTTTGCCACTGAAATCACAAGTGATCCCATCTGGGTATCTCCCAAGACCCCCCAACAAGCTTCGCTTCCACCACAACGTGAGCCTCACAATCTCCATCACTGTTGGCACGCCCCCACAGAACATGTCCATGGTCATTGACACAGGAAGCGAACTCTCGTGGCTCCATTGCAACACTAACACAACCGCAACCATACCCTACCCGTTTTTCAACCCGAATATCTCTTCTTCTTACACACCCATCTCGTGCTCCTCGCCAACCTGCACGACTCGTACCCGAGACTTTCCCATACCCGCTTCATGCGACTCCAACAACCTCTGCCATGCAACACTCTCCTATGCCGACGCTTCTTCCTCGGAAGGGAACCTTGCTTCCGACACATTCGGGTTCGGATCCTCCTTTAACCCGGGAATTGTATTCGGTTGCATGAACTCTTCCTACAGCACTAACTCCGAGTCGGACTCCAACACAACCGGGTTAATGGGTATGAACCTCGGGTCACTCTCATTGGTTTCTCAGTTAAAAATACCCAAATTCTCGTACTGCATATCGGGTTCCGATTTCTCGGGAATTTTACTTCTCGGGGAGTCCAACTTCTCGTGGGGCGGGTCGTTAAATTATACTCCCTTGGTTCAAATATCCACTCCGTTACCTTATTTCGACCGGTCCGCATACACGGTCCGCCTCGAAGGAATTAAGATTTCGGATAAGTTGTTAAATATATCGGGTAACCTATTTGTTCCGGATCATACCGGAGCGGGTCAAACCATGTTTGATTTGGGTACCCAGTTTTCGTATTTACTCGGGCCGGTTTATAATGCATTAAGAGATGAGTTTTTGAACCAAACAAATGGTACATTACGGGCACTGGATGATCCGAATTTTGTTTTCCAGATAGCAATGGATCTTTGTTACCGGGTGCCCGTTAACCAGTCCGAATTGCCCGAGTTACCGAGTGTGAGTTTGGTTTTTGAAGGGGCCGAGATGCGGGTTTTTGGTGACCAACTTTTATATCGGGTACCCGGTTTTGTTTGGGGCAATGACTCGGTTTATTGCTTCACCTTTGGGAATTCGGATCTTCTTGGTGTGGAGGCATTTATCATTGGACATCACCATCAACAGAGTATGTGGATGGAGTTTGATCTTGTGGAACATAGGGTTGGATTGGCTCATGCACGTTGTGATTTGGTTGGGCAAAAGTTACTTGGTTTGGTCTGA 1329 0.4748 MRPKATPTIPYLKFIIFFIIEAPIGIFFNNHCEAKTLALPLKSQVIPSGYLPRPPNKLRFHHNVSLTISITVGTPPQNMSMVIDTGSELSWLHCNTNTTATIPYPFFNPNISSSYTPISCSSPTCTTRTRDFPIPASCDSNNLCHATLSYADASSSEGNLASDTFGFGSSFNPGIVFGCMNSSYSTNSESDSNTTGLMGMNLGSLSLVSQLKIPKFSYCISGSDFSGILLLGESNFSWGGSLNYTPLVQISTPLPYFDRSAYTVRLEGIKISDKLLNISGNLFVPDHTGAGQTMFDLGTQFSYLLGPVYNALRDEFLNQTNGTLRALDDPNFVFQIAMDLCYRVPVNQSELPELPSVSLVFEGAEMRVFGDQLLYRVPGFVWGNDSVYCFTFGNSDLLGVEAFIIGHHHQQSMWMEFDLVEHRVGLAHARCDLVGQKLLGLV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01247 442 Pfam Xylanase inhibitor N-terminal 68 232 IPR032861 -
Gma07g01247 442 PANTHER ASPARTIC PROTEINASE PCS1 30 439 - -
Gma07g01247 442 SUPERFAMILY Acid proteases 67 432 IPR021109 -
Gma07g01247 442 PANTHER ASPARTYL PROTEASE-RELATED 30 439 IPR001461 GO:0004190|GO:0006508
Gma07g01247 442 Gene3D Acid Proteases 59 233 IPR021109 -
Gma07g01247 442 Gene3D Acid Proteases 234 434 IPR021109 -
Gma07g01247 442 CDD pepsin_A_like_plant 67 431 IPR034161 -
Gma07g01247 442 Pfam Xylanase inhibitor C-terminal 261 426 IPR032799 -
Gma07g01247 442 ProSiteProfiles Peptidase family A1 domain profile. 66 427 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01247 Gma-Chr7 16266127 16267455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01247 26 432 Miscellaneous Gene Families AT1G77480 23.944 2.61e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01247 - - gmx:100813686 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01247 07 16266127 16267455 Gma07g01247 07 16266127 16267455 ECH
Gma07g01247 07 16266127 16267455 Gma11g01240 11 10580431 10582078 ECH
Gma07g01247 07 16266127 16267455 Gma12g00539 12 4488518 4489603 ECH
Gma07g01247 07 16266127 16267455 Gma13g03020 13 44645690 44647209 ECH
Gma07g01247 07 16266127 16267455 Gma15g00342 15 2932848 2934331 ECH