Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01236 ATGGATCCGCGTCTTTGTGGTCCCCCTAATGAAATCCAGTTGGGGAATCAGAGATTTGAAAATGGTTTCTTTGATCAAAGTAGGGAATTTGGTTACCTGCAGTCCAATCTAGTACCAACTGACACACCTTCTTCATCTTCGGTTTGGACTCATGAGGAACCTTCTCCGGAGGATTGTGAATTTTCTGATGGAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGCGGCAAGATTCTTTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTGATTGGCGAAAAGTACCCTTCTACGCCTTTAGGGCATCCAAGTTCTGTTGATCCAGATGATGGTAGTGGGGAGCATAATTTATCTGAAAACTATGGTACTTGTTCTTACAATGATGGTGACCTCAGTAGCATTTTTACTAACAATTTTTTGCGACGAAATTTGGGGGAACTTCCTAACCAGAATTTTCGAGGCAATAGCATTTCACAGTCATCTTATAGCTCTTCAAACAGTGTGAAAAGTAGTGTGGAAGGGCCTGTGGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGTGAGACTCAATCCATTTTGCTATTTCAGAAGGGTGTTGAGGAGGCTAGCAAGTTTCTTCCAAGTGGAAATGGACTCTTTGCTAATTTGGATGTGGCTAATTTTTCAAAACTAAAGCCTCGAGTGGGGAGTGATGAATTGCCTGTTAAGGTGGAGAAGGACGAGGGTGAGTCTTTTCCTGCTGGATCCAAAATAAGGAAGCACCATCACATGGAAGAGGAGGATGTTGAAGAAAATAGAAGCAGCAAGCAAGCTGCAATTTTCTCTGAACCTACATTGCGATCATCCATGATTGATATAATCCTGCTTCATAGTTTAGGGGATGGTAAGAAGCATTTTATGGCCCGCCGTGAGGCTTTGCAAACCAAGAATGACCAGATAGTGGTGTCAAATGGTAAATCAAAGGCTTCCAATGGTGGCAAGGGGCGTAGTAAGAAACAAAACGGGAAAAAGGAAGTGGTAGATTTGAGAACACTTTTGGTTCTTTGTGCACAGGCTGTTGCAGCAGATGACTATAAAAGCGCGCATGAGTTGCTAAAACGGATCAGGCAGCACTCAAACCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAAGCCCGCTTGGCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTGAAGGCTTATCATCTATATCTTGCTGCTTGCCCTTTTAGGAAGATGACTGCTTTTATCTCTAATGTTACAATAAGGAAATCTTCAGCAAATTCACCAAGGCTCCATATTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTAATTCAGAGACTTTCACTAGCAGGAGGAGCACCTAAACTTCGGATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTGTAGAAACTGGATGCCGCTTGGCAGCATATGCTGAATCGTTTAAGGTGGAATTTGAGTACAATGCTATAGCGAAAAAATGGGAAACAATTCAACTCGAGGAACTCAAGATTGATAGGGACGAGTACCTTGTTGTGACCTGTTTTTATCGCTGTAAAAATGTGCTGGATGAATCTGTGGTTGTGGACAGTCCAAGGAATAAATTCCTCAGTTTGATAAGGAAGGTCAACCCGAATATATTCATTCATGGCATTACTAACGGGGCCTTTAATGCGCCTTTCTTTGTTACTCGATTCAGGGAGGCACTGTTTCACTACTCTTCACTCTTTGACATGCTTGAAACCATTGTGCCTCGTGAGGAATGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGCAGGGAAGCATTGAATGTCATAGCTTGTGAAGGCTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAGCGCGAATTCTAAGGGCTGGATTTTTGCAACAACCTTTTGAGCGTGAGATAGTAAAGAGGGCAATAGAGAAAGTAACGACTAGCTACCACAAGGATTTTGTAATTGATGAAGATAGCCAATGGGCTTTGTGCATTAGTTTGACTTCTGAGGAGCTCAGGGTGAGCTCAATATGTAGGGTTCGAGATCAAAAGTAA 2199 0.4256 MDPRLCGPPNEIQLGNQRFENGFFDQSREFGYLQSNLVPTDTPSSSSVWTHEEPSPEDCEFSDGILSYISQILMEEDMEDKTCMRQDSLDLQIAERSFYEVIGEKYPSTPLGHPSSVDPDDGSGEHNLSENYGTCSYNDGDLSSIFTNNFLRRNLGELPNQNFRGNSISQSSYSSSNSVKSSVEGPVDSPSSILQVPDLNSETQSILLFQKGVEEASKFLPSGNGLFANLDVANFSKLKPRVGSDELPVKVEKDEGESFPAGSKIRKHHHMEEEDVEENRSSKQAAIFSEPTLRSSMIDIILLHSLGDGKKHFMARREALQTKNDQIVVSNGKSKASNGGKGRSKKQNGKKEVVDLRTLLVLCAQAVAADDYKSAHELLKRIRQHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMTAFISNVTIRKSSANSPRLHIIDFGILYGFQWPTLIQRLSLAGGAPKLRITGIDFPQPGFRPAERIVETGCRLAAYAESFKVEFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRCKNVLDESVVVDSPRNKFLSLIRKVNPNIFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREEWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFLQQPFEREIVKRAIEKVTTSYHKDFVIDEDSQWALCISLTSEELRVSSICRVRDQK 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01236 732 Pfam GRAS domain family 356 711 IPR005202 -
Gma07g01236 732 MobiDBLite consensus disorder prediction 36 52 - -
Gma07g01236 732 MobiDBLite consensus disorder prediction 253 281 - -
Gma07g01236 732 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 711 IPR005202 -
Gma07g01236 732 MobiDBLite consensus disorder prediction 161 195 - -
Gma07g01236 732 PANTHER SCARECROW-LIKE PROTEIN 9 29 711 - -
Gma07g01236 732 MobiDBLite consensus disorder prediction 253 282 - -
Gma07g01236 732 ProSiteProfiles GRAS family profile. 347 727 IPR005202 -
Gma07g01236 732 MobiDBLite consensus disorder prediction 328 349 - -
Gma07g01236 732 MobiDBLite consensus disorder prediction 105 131 - -
Gma07g01236 732 MobiDBLite consensus disorder prediction 36 56 - -
Gma07g01236 732 MobiDBLite consensus disorder prediction 328 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01236 Gma-Chr7 16133120 16136105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01236 57 711 GRAS Transcription Factor Family AT2G37650 52.616 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma07g01236 GRAS 9.5e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01236 - - gmx:100807788 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01236 07 16133120 16136105 Gma07g01236 07 16133120 16136105 ECH
Gma07g01236 07 16133120 16136105 Gma11g01254 11 10681268 10684474 ECH
Gma07g01236 07 16133120 16136105 Gma12g00552 12 4619557 4625233 ECH