Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01232 ATGGCTGCCATTGTTTTCATCCACATTGCATCATTGGTCTCTCTTTTTGTTGCAACAAGTGCAAGAATCCCTGGAGTTTACACCGGTGGCCCCTGGCAGAGTGCTCATGCCACCTTCTACGGTGGCAGTGATGCTTCTGGAACAATGGGTGGTGCTTGTGGGTACGGAAACCTGTACAGCCAGGGCTACGGAGTTAACACCGCGGCGCTGAGCACTGCTCTGTTCAACAACGGTTTAAGCTGCGGCGCGTGCTTCGAGATAAAGTGCGACCAGGATCCACGGTGGTGCAACCCCGGGAACCCTTCGATCCTAATCACTGCGACCaacttctgccctccgaacttcgcccttccgaacGACAATGGCGGATGGTGCAACCCTCCCCGCCCGCACTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCCCAGTATCGCGCCGGAATCGTCCCCGTCGCATACCGCCGGGTGCCATGCAGGAAGGCAGGGGGGATCAGATTCACAATCAACGGTTTCCGTTACTTCAACCTGGTGCTGATCACCAACGTCGCAGGTGCAGGGGATATCGTGCGCGTGAGCGTGAAAGGAAGCAAAACCGCGTGGATGAGCATGAGCCGCAACTGGGGGCAAAATTGGCAATCCAACGCGGTTCTGGTGGGCCAGGCCCTTTCCTTTAGGGTTACCGGCAGTGACCGACGCACCTCAACCTCCTGGAACGTGGCACCACCTAATTGGCAGTTCGGACAAACCTTCACCGGAAAGAATTTCCGTGTCTAA 777 0.5431 MAAIVFIHIASLVSLFVATSARIPGVYTGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGNPSILITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVAYRRVPCRKAGGIRFTINGFRYFNLVLITNVAGAGDIVRVSVKGSKTAWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNVAPPNWQFGQTFTGKNFRV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01232 258 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 122 139 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 139 152 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 163 175 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 175 196 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 210 231 IPR002963 GO:0009664
Gma07g01232 258 PRINTS Expansin signature 239 255 IPR002963 GO:0009664
Gma07g01232 258 Gene3D - 18 160 IPR036908 -
Gma07g01232 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 253 IPR007117 -
Gma07g01232 258 SMART dpbb_1 67 154 IPR007112 -
Gma07g01232 258 PANTHER EXPANSIN-A15 4 257 IPR002963 GO:0009664
Gma07g01232 258 SUPERFAMILY PHL pollen allergen 162 253 IPR036749 -
Gma07g01232 258 SUPERFAMILY Barwin-like endoglucanases 31 182 IPR036908 -
Gma07g01232 258 Pfam Lytic transglycolase 67 154 IPR009009 -
Gma07g01232 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 164 IPR007112 -
Gma07g01232 258 PANTHER EXPANSIN 4 257 - -
Gma07g01232 258 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Gma07g01232 258 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Gma07g01232 258 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Gma07g01232 258 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Gma07g01232 258 PRINTS Expansin/Lol pI family signature 201 215 IPR007118 GO:0005576
Gma07g01232 258 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Gma07g01232 258 Pfam Expansin C-terminal domain 165 242 IPR007117 -
Gma07g01232 258 Gene3D - 164 256 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01232 Gma-Chr7 16060415 16064554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01232 1 258 Expansin Gene Family AT2G39700 83.333 5.50e-162 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01232 - - gmx:547955 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01232 07 16060415 16064554 Gma18g00357 18 3085445 3087144 ECH
Gma07g01232 07 16060415 16064554 Gma11g02218 11 37448228 37450037 ECH
Gma07g01232 07 16060415 16064554 Gma02g02346 02 49524639 49526505 ECH
Gma07g01232 07 16060415 16064554 Gma14g00584 14 5690498 5692459 ECH
Gma07g01232 07 16060415 16064554 Gma07g01232 07 16060415 16064554 ECH
Gma07g01232 07 16060415 16064554 Gma11g01259 11 10732993 10735054 ECH
Gma07g01232 07 16060415 16064554 Gma12g00557 12 4664488 4666971 ECH
Gma07g01232 07 16060415 16064554 Gma13g03005 13 44534715 44536116 ECH