Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01228 ATGAACACACCTCTTAACAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATTAAGAAAGGATCTCTTACAGAGGAAGAGCAGCGTCTAGTCATCAACCTTCAAGCAACACACGGCAACAAGTGGAAGAAAATTGCAGCACAAGTCCCTGGTCGCACAGCAAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAGCAAAGGGAAACAAAGGGGAATAACTGCACCATTGACCCAATTAACGATAGCAAGTACGAGCATATCCTTGAGAGTTTTGCAGAGAAGCTAGTGAAAGAAAGGCCTTCAACATCAACATCAACATCATTTGTTATGGCTACTTCCAACAGTTCTTTTCTGCATGCTGATGCACCGGCTCCTGCACCAGCCTTGCTTCCGTCTTGGCTTTCCAATTCCAATGGCACTGCACCTGTGAGGCCACCCTCCCCTTCTGTGACTCTTAGTCTTTCTCCCTCGACGGTGGCAGCGCCTCCTCCATGGATGCAGCCCCCCGTCAGAGGACAGGACAATGCTAGTCCTCTTGTTTTGGGGAATGTGGCGCCTCACGGGGCTGTTCTAGCATTTGGTGAGAACATGGTGATGTCTGAGCTAGTGGAGTGCTGCAAGGAGTTGGATGAAGTGCATCATGCTTTGGCCGGGCATAAGAAGGAGGCAGCATGGCGGTTAAGCAGGGTGGAGCTGCAGTTGGAGTCTGAGAAGGCCGGGCGAAGGAGGGAGAAGATGGAGGAAATCGAAGCGAAAATCAAAGCTCTGAGGGAGGAGCAAACGGCTGCATTGGATAGAATTGAAGCAGAATATAGGGAGCAGTTGGCAGGGCTGAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCGACTTACTAAGTTTCTAGAACAGGTAGGGTGCAGATCAAGGCTCACTGAACCAAATGGAAGATAG 987 0.4995 MNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVINLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGNNCTIDPINDSKYEHILESFAEKLVKERPSTSTSTSFVMATSNSSFLHADAPAPAPALLPSWLSNSNGTAPVRPPSPSVTLSLSPSTVAAPPPWMQPPVRGQDNASPLVLGNVAPHGAVLAFGENMVMSELVECCKELDEVHHALAGHKKEAAWRLSRVELQLESEKAGRRREKMEEIEAKIKALREEQTAALDRIEAEYREQLAGLRRDAESKEQKLAEQWAAKHLRLTKFLEQVGCRSRLTEPNGR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01228 328 PANTHER TRANSCRIPTION FACTOR AS1 1 328 IPR031055 GO:0005634|GO:0006351|GO:0010338
Gma07g01228 328 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 328 - -
Gma07g01228 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Gma07g01228 328 SMART sant 25 73 IPR001005 -
Gma07g01228 328 Coils Coil 277 297 - -
Gma07g01228 328 SUPERFAMILY Homeodomain-like 6 76 IPR009057 -
Gma07g01228 328 CDD SANT 30 71 IPR001005 -
Gma07g01228 328 Pfam Myb-like DNA-binding domain 26 61 IPR001005 -
Gma07g01228 328 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Gma07g01228 328 Coils Coil 248 275 - -
Gma07g01228 328 Gene3D - 29 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01228 Gma-Chr7 16000782 16001768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01228 1 319 MYB Transcription Factor Family AT2G37630 64.458 1.45e-137 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma07g01228 Myb_DNA-binding 9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01228 K09422 - gmx:732551 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01228 07 16000782 16001768 Gma07g01228 07 16000782 16001768 ECH