Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01215 ATGTCCCCAGCAGGTTCACCAAGATGGAGCCCTACCACAGAACAGCTCATGATCTTGGAGGAACTGTACAGGAGTGGCATTAGAACTCCTAGTGCATCTCAAATTCAGCAAATTACTACACACCTTTCTTTCTATGGCAGGATAGAAGGAAAGAATGTGTTCTACTGGTTTCAGAACCACAAGGCTAGGGATAGACAGAAGCTCAGAAGGAAACTCACCAAGCAACTGCAGCTACAGCAGCAACAACAACAACAGCTCCAACTCCACCATCATTGCCCAAAACTCAATCAAGATCATTTCACTAACCATTTTGTTGGTAACTTTGGTTATAGCACTCTTCGTTCTACTACCCACGATTTTCCCTTTTTTAACCCACCTAGCTTGCTTTTTCAGGGAGGTGCTGCGAACACATCGTCAGAACAAGCATTGAGTTGCAAATGGAATGTGCATAACCCTCAAAGTAATTTGGTGGAGAGTAAAGAGATGGCATTCTGCAACTATGGTTGGACACTTGTGGATGTTGATAATAATCAAGCATCTTCATGTTGCACCACTCGACCTGTCAAGACTCTTGATCTCTTTCCTCTCACAACTACCAGAATCAGTGAAGACTGCACCACACCACCCAATCGCTCTCCTCTCAAGTCTCACTTCACCGTAACGCGCATGCCTTTTGCTAACCTGTATCTGAGATACAAAATGCCAAAAGTAAAGACAAACCGTGTTACATACCCAGAGGGCTGGGAATTAATTGAGCCTACTCTCCATGAACTTCAAGCAAAGATGAGGGAAGCTGAGAACGATCCACATGATGGCAAGAGAAACTGTGAGACATTATGGCCTATATTTAAGATTGCACACCAGAAGAGCCGCTACATATTTGACCTCTATCATCAAAGGAAGGAGATTTCTAAAGAATTGTATGAATTCTGTTTAGATCAAGGATATGCTGACCACAATCTAATTGCAAAATGGAAGAAGCCTGGTTATGAACGTCTATGCTGCTTGGGGTGTATGCAGCCACGCAATCACAATTTTGCCACCACTTGTGTTTGCAGAGTTCCCAAGAACCTTAGGGAGGAGAAGGTTATAGAGTGTGTTCATTGTGGTTGCAAGGGCTGTGCTAGCGGGGACTGA 1137 0.4398 MSPAGSPRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLTKQLQLQQQQQQQLQLHHHCPKLNQDHFTNHFVGNFGYSTLRSTTHDFPFFNPPSLLFQGGAANTSSEQALSCKWNVHNPQSNLVESKEMAFCNYGWTLVDVDNNQASSCCTTRPVKTLDLFPLTTTRISEDCTTPPNRSPLKSHFTVTRMPFANLYLRYKMPKVKTNRVTYPEGWELIEPTLHELQAKMREAENDPHDGKRNCETLWPIFKIAHQKSRYIFDLYHQRKEISKELYEFCLDQGYADHNLIAKWKKPGYERLCCLGCMQPRNHNFATTCVCRVPKNLREEKVIECVHCGCKGCASGD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01215 378 ProSitePatterns G10 protein signature 2. 366 375 IPR018230 GO:0005634
Gma07g01215 378 PANTHER G10, PUTATIVE-RELATED 234 378 - -
Gma07g01215 378 PRINTS G10 protein signature 245 265 IPR001748 GO:0005634
Gma07g01215 378 PRINTS G10 protein signature 304 329 IPR001748 GO:0005634
Gma07g01215 378 PRINTS G10 protein signature 330 355 IPR001748 GO:0005634
Gma07g01215 378 PRINTS G10 protein signature 366 375 IPR001748 GO:0005634
Gma07g01215 378 PRINTS G10 protein signature 280 303 IPR001748 GO:0005634
Gma07g01215 378 Coils Coil 65 89 - -
Gma07g01215 378 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Gma07g01215 378 PANTHER PROTEIN BUD31-RELATED 234 378 IPR001748 GO:0005634
Gma07g01215 378 SUPERFAMILY Homeodomain-like 5 70 IPR009057 -
Gma07g01215 378 Pfam G10 protein 234 376 IPR001748 GO:0005634
Gma07g01215 378 SMART HOX_1 4 71 IPR001356 GO:0003677
Gma07g01215 378 CDD homeodomain 7 67 IPR001356 GO:0003677
Gma07g01215 378 Gene3D - 3 67 - -
Gma07g01215 378 Pfam Homeodomain 7 66 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01215 Gma-Chr7 15867710 15874267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01215 8 93 Wox Gene Family AT3G11260 58.140 6.57e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma07g01215 G10 8.7e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01215 K12873 - gmx:102662354 398.667