Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01213 ATGAGCAGGAACGAAGGCAGTTCCTTGCAGCAGGCAATTGGAGCATCGGCTGAGGCGGAGACCATGGACACAGACGCTGCTGCTGCGATATGGAAAGAAATTGAGGCTTCAGAGAGTTACCTTGTTTGTTCTATGTACGAAGAAGCGGCACAATTAGCTTCCTCTGTTTTGGAACGCTTGCGTCATTCCCATCATGATATCGATAGAGATGATATGTTGGAATCAAGTGCTATGGTGCTGCTTCAGGCATTCAACCAACTTCCCTCCAAGACACCACACATTCTTAATCAACTCACACTATACTTCGTTTCACCCAAAGCTATTCCTTCCCGTCTTCTTCTTACTGGGTCAGCTTGTTTTCAAATAGCACAAGGTTCTGCACTTTCCGTTCAACAATTTCTCCACGAGTTTCTCAATGGATGGACTCTTGAACATTCACAATATTCTGCTGTCATTACCGAGGCTGCAAGTAGAGACCAAAGCCGCCGCTTCATTCTTCTTCCAATTGTTGAATATTTGCAAGTTGTTGAGCTCTATGCCGTCACGCTTCTTGCAACACTTCAAAAAAATGTTGATCTTGCAATCTCCTGGGTTGAGAATGCTTCATTGCCTGAGGAAAATCGACAGGAACTTCTGAGAAGATTACACTCCATGCAGTCTCCTAAAAGTACCATTTTGTCTCAAAGTTCCTTTCTGCAGTCACCCACAAATAGCAATGAAGCTTATCCTTTGAAAGAACAAAATGTGTCTGAAGGATTACCAAAAGCCTTGAAAAGTAATGAAAAGTATAGGTCCAAAGAAGCTGTTACAAAATTGTCTGAACGAATAGAAGCATGTTTCTGGTGCTTCCGTGGTATCAATTTGAAGATTGGCACTTCTAAGTTTGTCATAACTAGTGGGAAGATCATGCTTGGTTGTTTAATATTGTTCATCTATTATGTTTTCAGAAAGAAGCAAGCTACTTTAGAAAGGATTGTCAGAAGACAGGCAATGGCCGTAAAGAGGGCTTTGGTAGATTTGTGGCAGCTTGCGTTTTCCTACCAAGTAAATCCTCTGGCAGCTGTTCAACCACTGTCTGCTACAACACGTCAAGACACAGAATCTCTCCTCAAATTCAGAGACTCCCTTGAAAACAACAACGCGTTGTTGTCCTCATGGAATGCATCCATCCCTCCATGTTCAGATGATGATGCATCATCCCACTGGCCTCACGTTCAGTGTTACAAGGGACACGTCTGGGGTTTGAAGCTGGAGAGCATGAGGCTCAAAGGTGTCATTGACGTCCAGTCCCTCCTGGATTTACCGTATCTCAGAACCATAAGCCTCATGAACAATGACTTCGACACTGCATGGCCTGAAATCAACAAGGTTGTGGGTTTGAAGACCATTTTCCTTTCAAACAACAAGTTCTCCGGGGAGATTCCGGCTCAGGCTTTTCAGGGCATGCAATGGTTGAAGAAGATTCATTTGTCAAACAACCAGTTCACAGGTCCTATTCCAACTTCCCTCGCATCCATTCCTAGGCTTATGGAGTTGAGGTTGGAGGGTAACCATTTCACCGGCCCCATTCCCAATTTTCAACATGCATTCAAATCATTTAGCGTAGCCAATAATCAATTAAAGGGAGAAATACCAGCCAGCCTCCATAACATGCCAGCTTCATCTTTCTCTGGTAATGAAGGGGTATGTGGAACACCGTTAAGTGCATGCTCCTCCTCCAAAAAGAAATCAACCGTGATTTTTGTTGTGGCTGTGGTTCTTGTTATTTTTGGACTGATAGTGATTGGAGCAGTAATATTGTTAGTCCTGCGTCGTCGAAGAAGAAAACAAGCTGGGCCAGAAGTGGCTTCTGCGGAAGAAGCAGGGTCAGATAAAGGAAGTAGGATGTGGATGCATAGTAGCTCCTCGAGCCACGGCAAGAGACGCTTCAGGTTATCATTTATGAGGGATGAAAGAGATGATTTTGATTGGCGGGATCTGCTGAAATCCTCAGCAAGGATTTTGCGCAGCGATGGTTACAGCTCTTCCTGCAAGGCTGTTCTGTTGGATGGGACTGAGATTGTGGTGAAGAAATTCACGCAGATGAACAATGTAGGGAGGGACGAGTTTCGGGAGCACATGCGACGGATTGGAAGCTTCAATCATCCTAATCTCCTTCCTCTCGTCGCCTACTACTGCATAGAGGAGGAGAGAGTCTTGATTACCGACTTTGTTCCCAATGGAAGCTTGGCTGCTCGCCTTCACGGATCCCAACCTGTAGGACAAGCAAGCCTGGATTGGGGAAGCCGGTTGAAGATAGTGAAAGGCATAGCAAAAGGACTTGAGAATCTGTACAGTGAGATGCCAAGCCTAATTGCGGCACATGGGAATCTAAAGTCCTCCAACGTTCTTTTGAGTGAATCTTTGGAGCCACTCCTCACAGACTATGGGTTGTTACCAGTGATAAACCAGGACAGTGCTCCTAAGATGATGTTCATCTACAAGTCCCCGGAGTATGTGCAGCATGGCCGCATCACAAAGAAGACTGATGTGTGGAGTCTTGGGATACTCATCTTGGAGATTCTCACTGGCAACTTCCCTGATAACTTTCTACAAGACAAAGGAAGTGATCAACAGAATTTGGCAAATTGGGTGCATTCACAAGAGTGGACTAGTGAGATGTTTGATAAGGACATGATGATGGAGACAAACAATAACAACAGCGAGGGGGAGATGATCAAGCTTTTGAAGATTGCATTGGCATGCTGTGAATGGGATGAGGACAAGAGATGGGACTTAAAAGAAGCTGTACAAAGAATTCATGAGGTCAACGAGGAGGACGATAATGGCCATGACTCAGATGGCGAAGTCACTATCTCCATAGAATAA 2868 0.448 MSRNEGSSLQQAIGASAEAETMDTDAAAAIWKEIEASESYLVCSMYEEAAQLASSVLERLRHSHHDIDRDDMLESSAMVLLQAFNQLPSKTPHILNQLTLYFVSPKAIPSRLLLTGSACFQIAQGSALSVQQFLHEFLNGWTLEHSQYSAVITEAASRDQSRRFILLPIVEYLQVVELYAVTLLATLQKNVDLAISWVENASLPEENRQELLRRLHSMQSPKSTILSQSSFLQSPTNSNEAYPLKEQNVSEGLPKALKSNEKYRSKEAVTKLSERIEACFWCFRGINLKIGTSKFVITSGKIMLGCLILFIYYVFRKKQATLERIVRRQAMAVKRALVDLWQLAFSYQVNPLAAVQPLSATTRQDTESLLKFRDSLENNNALLSSWNASIPPCSDDDASSHWPHVQCYKGHVWGLKLESMRLKGVIDVQSLLDLPYLRTISLMNNDFDTAWPEINKVVGLKTIFLSNNKFSGEIPAQAFQGMQWLKKIHLSNNQFTGPIPTSLASIPRLMELRLEGNHFTGPIPNFQHAFKSFSVANNQLKGEIPASLHNMPASSFSGNEGVCGTPLSACSSSKKKSTVIFVVAVVLVIFGLIVIGAVILLVLRRRRRKQAGPEVASAEEAGSDKGSRMWMHSSSSSHGKRRFRLSFMRDERDDFDWRDLLKSSARILRSDGYSSSCKAVLLDGTEIVVKKFTQMNNVGRDEFREHMRRIGSFNHPNLLPLVAYYCIEEERVLITDFVPNGSLAARLHGSQPVGQASLDWGSRLKIVKGIAKGLENLYSEMPSLIAAHGNLKSSNVLLSESLEPLLTDYGLLPVINQDSAPKMMFIYKSPEYVQHGRITKKTDVWSLGILILEILTGNFPDNFLQDKGSDQQNLANWVHSQEWTSEMFDKDMMMETNNNNSEGEMIKLLKIALACCEWDEDKRWDLKEAVQRIHEVNEEDDNGHDSDGEVTISIE 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01213 955 Pfam Leucine rich repeat 459 519 IPR001611 GO:0005515
Gma07g01213 955 Pfam Leucine rich repeat N-terminal domain 364 407 IPR013210 -
Gma07g01213 955 MobiDBLite consensus disorder prediction 612 635 - -
Gma07g01213 955 SUPERFAMILY Protein kinase-like (PK-like) 666 934 IPR011009 -
Gma07g01213 955 Pfam Protein kinase domain 676 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01213 955 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 359 944 - -
Gma07g01213 955 Gene3D Ribonuclease Inhibitor 364 531 IPR032675 -
Gma07g01213 955 Gene3D Transferase(Phosphotransferase) domain 1 738 952 - -
Gma07g01213 955 SUPERFAMILY L domain-like 361 551 - -
Gma07g01213 955 Gene3D Phosphorylase Kinase; domain 1 638 737 - -
Gma07g01213 955 ProSiteProfiles Protein kinase domain profile. 662 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01213 955 Gene3D Ribonuclease Inhibitor 532 571 IPR032675 -
Gma07g01213 955 PANTHER LRR RECEPTOR-LIKE KINASE 359 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01213 Gma-Chr7 15844349 15852638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01213 365 947 Receptor kinase-like Gene Family AT5G35390 46.774 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma07g01213 Pkinase 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01213 - - gmx:100802475 1132.86