LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma07g01196	ATGGCGTTGGGCATGAGCAGGTTCAAGAGGGAGCAATGCAACCGCACAAAACATGATTCTAGCTTCTCCCATTGGAAGATTCTGATTGGCCCTCGTGATTGGGAAGACCATTCGAAAGGAAAGGAAGGGTGTTCAAAGTACAGGATTCATAACCTCCCACAACAATCGGGTCCAGGAGTCTATGAGCTTGGAATAGCTGCTGCGGCATCAGTGTCAGAGCGTAAAATTTACAAGCTTGTCCCTCACCGTCACCGCATAGTGGTTGTTTACCTCGGACAAACTGAAAATGTGAGAGAACGACTCCGGCGTTATGGCGGAAATGGGGACCACTTGGAGGATTCTTCTCTCCACTTGTTTCAGCAAGTCTTTTCACAAGGATTCTCAATCCTTTATAGATGGGCTCCTATGCAAAACAAGGAAGATGCCCTGCGAACAGAAACTGAGCTGCTCAGTACATTTGATTATGCATGGAACACAAGAAGTAATTGTGTCCGGAGGCCTGATGATATTCTTCAAAAGCTCCATCAAATTGCTTCAGGCACTAGAACACTTTCAGATATTGCCAGAGCTCTTCTGCCTTTCACTCAGAAGCAAGTGGGCATCCAAATTAAATCAATCAAGTTAGATGAAGCAGACAATGGCAGCAGCTATAACAATCTCCTATCTCGACTATTCAGCTTTAACAGATCTCGTCCTAGGTTAGTTCAAGATATCACTGGTGCCATTCAGGAAAAAGAGAATGGTAAAATTTGTGGAGTGGCGCTGGGTGATGGTTCAATTTGTACAAGGCCACCAGCTGAAAAACGAATGAGGTGTCCTGAACACAAAGGAATGAGAACAAATGTGTCCACTGCCAAAGCAATAATAGGGGCACCCATGTCAGAGAGCCATGATTTAGAAGACCCTCCTCAAACAGTGGTTGATGAAAGTCTCACAAACACAGATTATATATGTGGAATCCTCTTAAGTGATGGCTCCACCTGTACAAGACAACCAGTTAAAGGAAGGAAAAGGTGCCATGAGCACAAAGGGAGGAGAATTCGTGCAGCATCTATTCAAACAAAGGACAATGGATACAAATACCAAAATAATGTCAGCAATGATGTGGAAGACCCTCCACAAACACTTGTTGATGAGAGTATCACAAACACCAATATATGTGGAATCATATTAAATGATGGCTCCACTTGTACAAGACATCCAGTTAAAGGAAGAAAAAGGTGCCATGAGCACAAAGGGAGGAGAATTCGTGCATCTTTTCATATAGCAAATAAAAAATAA	1281	0.4325	MALGMSRFKREQCNRTKHDSSFSHWKILIGPRDWEDHSKGKEGCSKYRIHNLPQQSGPGVYELGIAAAASVSERKIYKLVPHRHRIVVVYLGQTENVRERLRRYGGNGDHLEDSSLHLFQQVFSQGFSILYRWAPMQNKEDALRTETELLSTFDYAWNTRSNCVRRPDDILQKLHQIASGTRTLSDIARALLPFTQKQVGIQIKSIKLDEADNGSSYNNLLSRLFSFNRSRPRLVQDITGAIQEKENGKICGVALGDGSICTRPPAEKRMRCPEHKGMRTNVSTAKAIIGAPMSESHDLEDPPQTVVDESLTNTDYICGILLSDGSTCTRQPVKGRKRCHEHKGRRIRAASIQTKDNGYKYQNNVSNDVEDPPQTLVDESITNTNICGIILNDGSTCTRHPVKGRKRCHEHKGRRIRASFHIANKK	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma07g01196	426	Pfam	GIY-YIG domain-containing protein	22	171	-	-
	Gma07g01196	426	PANTHER	PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED	5	359	IPR038909	GO:0003677\|GO:0006355
	Gma07g01196	426	PANTHER	PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED	302	423	IPR038909	GO:0003677\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma07g01196	314	425	HRT Transcription Factor Family	AT5G56780	39.831	6.01e-20	90.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HRT	Gma07g01196		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma07g01196	-		-	gmx:100784450	872.848