Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01173 ATGAGTAAGATCAGCAACTTGAGTTCTGTAAGCAGTTCTGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTTGAAGGGAAGCCGGACTGGCTAGGCTTGCCCGCAGGAGTGAAGTTTGATCCCACAGACCAAGAACTAACAGAACATCTTGAAGCCAAAGTGGAGGCAAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGAATTTGTTATACCCATCCAGAGAAGCTTCCAGGAGTAACAAGAGATGGGTTGAGCAAGCACTTCTTCCATAGACCTTCAAAAGCTTACACAACTGGGACAAGAAAGAGGAGAAAGATTCAAAACGAATGTGACTTGCAAGGTGGAGAAACCCGGTGGCACAAGACTGGTAAGACCAGGCCAGTGATGGTGAATGGAAAACAAAAGGGTTGCAAGAAAATTCTAGTCCTCTACACCAACTTTGGAAAGAACAGAAAGCCCGAGAAAACCAACTGGGTGATGCACCAATACCATTTGGGGCAGCACGAGGAAGAGAAAGAAGGAGAGCTAGTGGTGTCAAAGATATTCTACCAGACACAACCAAGGCAGTGCAACTGGTCAGATAGAAGTGCAACAACTGGTGAAGGAAGTGGAGAACCTAACAACAACAGTACTGGTAGAAGGGACAGTGGAAGCGGAAGCTGTTCTTCTAAGGAAATTGTTACTCACAGAGATGAGATGTCTGCTGTTGTTGGTGTCCCTCCAATGACAGGTTTCACTACTCATCATCCTTTGGATATTCAACAGCTAAAACCTGATCACTTTAGCTTCATCCCTTTCAGgaaaacctttgatgagGTTGGAATAGGAGAGGCTTCCACAGCAAGAGAAGTAGTGCAAGCATCAGGTTCATGTGAAGAAGTGCATGAACGGCAGCGAGCACAACTTGTAGCTCATCATCAACAACAACAACATGCTCATCATCATCAAATTTCAAATTCAGCTTTTCATATCAGTAGGCCATCACATCCCATCTCTACCATTATCTCTCCCCCTCCCCTCCACCACACTTCCATCATTCTCGATGACAACAACTCTTACCATGTCTCTAGAATAATGCTCCAAAACGAAAACTTCCAGCAACAACATCATAAGCTTGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTAATCATGGGTTGCACTTCAACTGAAATCAAAGAGGAGTCGTCCATCACAAATCCACAAGAAGCTGAATGGTTGAAGTATTCTTATTGGCCAGACCCTGACAACCCGGATCATCATGGGTAG 1341 0.4459 MSKISNLSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELTEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNNSTGRRDSGSGSCSSKEIVTHRDEMSAVVGVPPMTGFTTHHPLDIQQLKPDHFSFIPFRKTFDEVGIGEASTAREVVQASGSCEEVHERQRAQLVAHHQQQQHAHHHQISNSAFHISRPSHPISTIISPPPLHHTSIILDDNNSYHVSRIMLQNENFQQQHHKLGGRSASGLEELIMGCTSTEIKEESSITNPQEAEWLKYSYWPDPDNPDHHG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01173 446 MobiDBLite consensus disorder prediction 215 253 - -
Gma07g01173 446 MobiDBLite consensus disorder prediction 215 248 - -
Gma07g01173 446 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Gma07g01173 446 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Gma07g01173 446 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 4 427 - -
Gma07g01173 446 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Gma07g01173 446 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Gma07g01173 446 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 427 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01173 Gma-Chr7 15436854 15441345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01173 11 443 NAC Transcription Factor Family AT5G56620 54.031 3.53e-138 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma07g01173 NAM 9.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01173 - - gmx:100791884 854.358