Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01168 ATGGAGAGCAGCTGCATTCTGGCTTTTCTTTTCCTCCTCATTCTCCACTCAAGTACAACAAAAGCTGCCTTCAgtgttggtggtggagttggtgtaggtgtaggtgtaggtataggtgttggtgttggtgttggCAATGGAAATGGTGGCAGTGGTGGAGTGGTTTGGGTTGGTGGAGGGATTAACAGCCCAGAGCCACCTAGATCTTCAGTGCCAAAGCTTGAAGGAGCATACACAGCACTTCAGGCATGGAAATCTGCAGTCACTGAGGACCCTCTTAAGATTTTATCAAGTTGGATTGGTCCCAATGTGTGTGCTTACAAAGGAGTCTTCTGTGCTGCAAACCCTCAAGATGAAACGGTTGGTGCATCAGCAGCATTCCCAGTTGTAGTAGCAGGCATAGATCTCAACCATGCAAATCTGAAAGGAACTCTTGTGAAGGAGCTCTCTCTACTCAGTGATTTGTCCCTTCTCCACCTCAACAGTAACAGATTCACTGGCACTGTTCCTGAAACATTCAGAGACCTTGTGTTTCTGGAAGAGTTAGACCTCAGCAACAACCAACTCTCAGGTCCTTTCCCTTCTGCTACTTTGTACATGCCAGGCCTCATCTACTTGGACCTCAGATTCAACTACTTCTCCGGGTCCCTCCCTCAGGAACTTTTCAGCAAGAACCTTGATGCATTGTTCCTCAATAATAACCAATTTGAAGGTGAAATTCCTCAAAACTTGGGCAGTTCCCCAGCCTCAGTGATAAACTTAGCCAACAACAAGTTAAGTGGAAGCATCCCAGCAAGTTTGGGCTTCATGGGTTCTAAAATAAAGGAGATTCTGTTCCTCAATAACCAGTTAACTGGATGCATTCCTGAGGGAGTTGGACTATTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAACTCACTCATGGGTCATTTGCCAGACACACTATCATGCCTGCAAGACATAGAAGTTCTCAATTTGGCTCATAACAAGCTCTCTGGGGAGTTATCAGATGTGGTGTGCTCTTTGAGAAGCCTTGCAAATCTAACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCACGAATGCTCAAGGCTTTTCTTTAGGAATGTTGGTTTTGATTTCTCACTAAACTGCATTCCTGATAGGGACATGCAGAGACCTCCACCTGAGTGCTCTGGCATACCAGGTGGAAGTCTTAGTTGTCTCAGAATCCCCACACCAAGGCCTCTTGTTTGTGGTTCAATGGCTGTAAGTAAGTCTAAGAACATTATTGATCCCACTTCATCATCTCCTCCTTGA 1302 0.4316 MESSCILAFLFLLILHSSTTKAAFSVGGGVGVGVGVGIGVGVGVGNGNGGSGGVVWVGGGINSPEPPRSSVPKLEGAYTALQAWKSAVTEDPLKILSSWIGPNVCAYKGVFCAANPQDETVGASAAFPVVVAGIDLNHANLKGTLVKELSLLSDLSLLHLNSNRFTGTVPETFRDLVFLEELDLSNNQLSGPFPSATLYMPGLIYLDLRFNYFSGSLPQELFSKNLDALFLNNNQFEGEIPQNLGSSPASVINLANNKLSGSIPASLGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTLSCLQDIEVLNLAHNKLSGELSDVVCSLRSLANLTVAYNFFSGFSHECSRLFFRNVGFDFSLNCIPDRDMQRPPPECSGIPGGSLSCLRIPTPRPLVCGSMAVSKSKNIIDPTSSSPP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01168 433 Gene3D Ribonuclease Inhibitor 247 368 IPR032675 -
Gma07g01168 433 PRINTS Leucine-rich repeat signature 179 192 - -
Gma07g01168 433 PRINTS Leucine-rich repeat signature 319 332 - -
Gma07g01168 433 PANTHER LRR/EXTENSIN 1 433 - -
Gma07g01168 433 Pfam Leucine rich repeat 155 212 IPR001611 GO:0005515
Gma07g01168 433 SUPERFAMILY L domain-like 79 365 - -
Gma07g01168 433 Gene3D Ribonuclease Inhibitor 77 246 IPR032675 -
Gma07g01168 433 Pfam Leucine rich repeat N-terminal domain 78 112 IPR013210 -
Gma07g01168 433 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01168 Gma-Chr7 15384679 15386245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01168 72 404 Leucine-rich Repeat extension Gene Families AT3G24480 48.673 9.42e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01168 - - gmx:100790827 789.26