Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01156 ATGTCAAACTTGCATTGCATGTTCATCTTGTTAGCAGTTCTTGTTCTTCTTCTGCAAAATTCCAGCAGAATACATTGTCATACCAAGGGAATTAGACCAAGACGTTCTGCAGGTAAAGTGTTATCGACCAACATGACTAGAGTGCATTATTCTGAACAGCAATTCATGAAATGGGTGAATTTTGTTGGTTCCCTCAAACACTCAGTTTTTAAGTCAGCTAAAAATAAGCTTGTGGCTTCTTACACTTTGCACGTTGATAAGAATCCTAATGCTGGAGATTTTACCTCAATTCAAGAAGCCATTGATTCCCTTCCATTCATCAATCTTGTGAGAGTGGTCATTAAAGTCCATGCAGGGGTCTACACGGAGAAAGTTAACATTCCTCCTTTGAAATCCTACATAACAATAGAAGGAGCTGGTGCAGATAAAACCATTGTTAAATGGGGTGACACTGCTCAAACACCTGGCTCAAATGGGAGGCCACTAGGAACCTATGGTTCAGCAACTTTTGCTGTGAATTCACCTTATTTCCTTGCCAAGAACATCACATTCCAAAACACAACTCCTGTTCCTGCACCAGGAGCAGTTGGAAAGCAAGCGGTTGCATTAAGGATTTCAGCAGACACAGCAGCATTTGTAGGCTGCAAATTCTTAGGAGCACAAGACACACTTTATGATCAATTGGGCAGACATTTCTATAAGGATTGTTACATCGAAGGCTCTGTTGATTTCATATTTGGCAACTCTCTCTCACTGTTTGAGGGATGTCACGTGCATGCCATAGCACAGAATACAGGGGCCGTAACAGCTCAAGGAAGGAGTAGTATGTTGGAGGACACGGGGTTCTCATTTGTGAACTGCAAGGTCACGGGATCAGGGGCACTATACCTTGGAAGGGCTTGGGGACCCTTTTCTCGCGTGGTCTTTGCCTACACATATATGGAAAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGATCCTAACCGTGAAATGACTGTATTCTACGGGCAGTACAAATGCACAGGACTTGGAGCAAGCTTTGCAGGGAGAGTACCATGGTCGAGAGAGCTTACTGACGAGGAAGCTACACCTTTTCTTTCACTTAGCTTTGTTGATGGAACCGAATGGATCAAAGTGTAG 1146 0.4346 MSNLHCMFILLAVLVLLLQNSSRIHCHTKGIRPRRSAGKVLSTNMTRVHYSEQQFMKWVNFVGSLKHSVFKSAKNKLVASYTLHVDKNPNAGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPPLKSYITIEGAGADKTIVKWGDTAQTPGSNGRPLGTYGSATFAVNSPYFLAKNITFQNTTPVPAPGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDQLGRHFYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMENIIIPKGWYNWGDPNREMTVFYGQYKCTGLGASFAGRVPWSRELTDEEATPFLSLSFVDGTEWIKV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01156 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Gma07g01156 381 Pfam Pectinesterase 90 375 IPR000070 GO:0030599|GO:0042545
Gma07g01156 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 380 - -
Gma07g01156 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
Gma07g01156 381 PANTHER PECTINESTERASE 7 380 - -
Gma07g01156 381 Gene3D - 78 381 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01156 Gma-Chr7 15250686 15255573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01156 83 380 Carbohydrate Esterase AT1G05310 47.712 3.78e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01156 K01051 - gmx:100817924 772.696