Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01076 ATGGATGAGCCATGGCTGAAATGGGTTTCTATTTTGGACACTAATGACTATCATTTATCCACTGAATGTGACATGAACTCTGTTGAAGAACCATTGGAGGGAGAGAATTCAGTGGATCCTGGAGAACTCTCATGGGAAAATCACTCCCCTAATTCATATCTCACAAAAGAAAGAACCACCCTTTTGAGCAATTCTTCATCTTTGGAAGAGATCAACACTAGCTTTGATATGACAAGTCTCAAACAACATGCTTCTCCACAGAAACCAAAGTCTTGCATTCTGTCTTTTGAGGATTCCACTTCAGTGCCAATTACTTCCAAGAAAACTTGCCAATTATATCATGGTGAACATTCAAAGGAGACACAAGAAGAGCTACCCAATAGAAAACCCCTCAAGAGGGATACAAGCTTTGATCACATAATGGCTGAGAGAAAAAGGAGAGAGAATATCAGCAGACTGTTCATAGCTCTTTCAGCCCTTATTCCGGGCTTGAAAAAGATGGACAAGGCTTCTGTTCTTTACAACGCTATAGAGCATGTGAAATATCTTCAGCAGCGTGTAAAGGATTTGGAAAAAGATAACAAGAAGAGAAAGACAGAATCCGTAGGATGTTTCAAAATAAATAAAACCAATGTTGCTGACAACGTTTGGGCATGTGATGATAAACCTATCAAGATATGTCCCAAAGTTGAAGCAAGAGTCTCAGGAAAAGATGTTGTCATCAGAGTAACGTGTGAGAAGCAAAAGAACATTTTACCTAAGCTACTGGCCAAGCTTGAAGCTCATAATCTCTCCATAGTGTGTAGCAATGTTTTGCCATTTGGGAATTCCGCTCTCAGCATTACCAGCATTGCTAAGATGGACCATGAATTCAGCTTGACAGTGGACACGTACGACCTAGTGAAAACCTTGACAGGGGAATTGTTGGAGTGCAGTAAAATGCAACGATAA 951 0.4027 MDEPWLKWVSILDTNDYHLSTECDMNSVEEPLEGENSVDPGELSWENHSPNSYLTKERTTLLSNSSSLEEINTSFDMTSLKQHASPQKPKSCILSFEDSTSVPITSKKTCQLYHGEHSKETQEELPNRKPLKRDTSFDHIMAERKRRENISRLFIALSALIPGLKKMDKASVLYNAIEHVKYLQQRVKDLEKDNKKRKTESVGCFKINKTNVADNVWACDDKPIKICPKVEARVSGKDVVIRVTCEKQKNILPKLLAKLEAHNLSIVCSNVLPFGNSALSITSIAKMDHEFSLTVDTYDLVKTLTGELLECSKMQR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01076 316 MobiDBLite consensus disorder prediction 115 134 - -
Gma07g01076 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 198 IPR036638 GO:0046983
Gma07g01076 316 Coils Coil 180 200 - -
Gma07g01076 316 MobiDBLite consensus disorder prediction 31 50 - -
Gma07g01076 316 PANTHER BHLH TRANSCRIPTION FACTOR 1 315 - -
Gma07g01076 316 SMART finulus 140 189 IPR011598 GO:0046983
Gma07g01076 316 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 315 - -
Gma07g01076 316 Gene3D - 132 203 IPR036638 GO:0046983
Gma07g01076 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Gma07g01076 316 Pfam Helix-loop-helix DNA-binding domain 139 184 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01076 Gma-Chr7 13615451 13620149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01076 81 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.161 1.29e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g01076 HLH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01076 - - gmx:100783561 630.172