Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01054 ATGGCGGAGTCCGAATTCGAACCAAACGTTGACCTCGAAGAGAAATCGTGGCACCTCCTCGCGCTCCTCCTCCGAATTGGCCACGCCGTTTACCCGCAACGCCTCGCCGCGCAGTGTCGTTTGTTCGCTGCCTCGCCGAACTTCGTCTGCCACGTCGGCACTCTCCCCGGCTCGCCGATCTCCGTCACCGACAACGGACTGGTCACGCCCTCCGTCGGCACCGTCTTCGCCCTCGGAAGCTTCTTCTCCCTCCACTTCTCGCCGCCGCAGCCACAAACGTACCGTTTCAGGAAACGCAAATCGCTTTTCGATTACGGCGAAGATGGAAGGGAGCACAAGAAGTTGGCGATTCGTGATGGACTTCGAGAATTTTCGTTCCAGAGTTTTGCTGATACCACAGAGACTCTGATGAGAAGAAATTTCCCTGTAATAAAATTTGAATCACAGAATATAGGTAGCAGGAGTTTTGTATTCCCCTTGCGTATTGATAAAAATGAAGAGTGTTCAGGTTGTCCAATGCCAAATTTTGAACATCGGGAAGCCAATAATGATGCCAGGACAACCATGTCTAATGGAGAGGTTTCTGAATCTATTATCAAAGCACTGACAAAAAAAAAATCAATTATCAAAGCAAGTTACTTGAACTGTCTGAAGCTAGTGGATAGAAATAGATTCATGGACTGTAATCTCTTTGTTGACCGTGCTCTCTTGGATCCCTCATTATGCAAAGACGGAATTGTTAACAGCCTTGGATTTGGGAAGAAAATGGATTCTTTTGGCACATTTATGCATGACTATGCCGAACAAAACAGTATTCGTCATGTGGATGAAGATGGTATTGGTAAAAGTAATACTTGCAAAGATCAACCGAGAGAACCTAATGAAGATGATGAGGTGGAAAGTGGTTCACAGAAAGGGCTGATTGATTCTGTCACAAATAGAGACAAGGAAGATGTTGCTCAGAGGGTCAATGCTGCACTATGTAGAGAAGAATTGACTAATGGTTTGGAACAAAAGAACCGTGTCCATGCAATGAATTTGGAAAAGGAGAGTGAGAGAAACACAGGCACTAAGTCTACAAATAAAATAGCAAATTCCTCTTCAATACCAAAGCGGCTTTTGAAATCTTCTAGCATATTAAAGGGAGGACAGAAGAATGATCTCCACCCTAAGTCACAAATTCTCAAAGAGTCACTAGCCAGTAATAAATTTGGTAATGTTCCAAAAAATGTTGATCAATGTAGAAATGATCAGAAACTTACAGCGAGGAAGCAAAATCGTAATGAGAACATGGCAGGAATTATTGCCACTACTACTAAGGTGGAGAAAAGAGCATATCCATCATTTGAAGCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACCGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTAAATAATGAAAGGAATATGCTCGAGCGTTTTGGTGGTAAAAACTATATAATAAGGTACGAGGGCTCTTTAAAAAATGGAAATAGCGATTGCTTTGTTTTAGAACATGTTGACCATGATAGACCTGAGGTTTTGAAAAAAGAAATTGATATAGTTCAGCTTCAATGGTACGGGTATTGCATGTTCAGGGCGCTTTATTGCTTACACAAAGAGGGAGTTGTTCACAGAGACGTTAAACCTGGAAACTTCCTTTACTCTCGAAAGTTAAGCAAAGGCTATCTTATTGATTTTAACCTTGCCATGGTTAGATTGCTCAACTTTCTTATCAAGAGTAAATCAAAACCAAGCCTTGATGCATCATCCAATGTTATTTCTTTCTCTTCTGGTTCTGCCCCTTTGGTCCGAGACAAGAACCTTGGAGGCAGCAAGTCTTTACCATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTAATAGGAATGCAAAGGAAAAGGCTTATACTGTTCATCTGAAAAATTGTCCTGATAAGGCTGGTGGGAGTTTTCTTAGAGCACAAGGAACAGATGGCTCTGGTATAACTTCTGCCAAAGATGCTAGCACTAGGACTGCTTCTGCAGAAAGGCTcagggaacctttaccttcccatggaagaaaggagcttatcagccttgtgaatactatgaaatgtgcaaacagttcaacaataggtccttcttctcaaaggaaaagggttactgctccctcaagcaaggcagatgacaacattttttatattaccccgatgcctttgcattcatctactgttggtgggggattattgagaagcaaaggtgatggaaagaaaaaagaaggttcatgtgttggaaccaaaggatttcgtgctccggagGTTTTGTTAAGGTCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGAGTCACTCTACTCTACTTGGTGATCGGGAAGACTCCTTTCACTGGCGACCCAGAACAGAATATAAAAGAAATTGTTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCTAAGCTACATGACCGTGAATTATCTTTTCCTGTGGAGTTACTTAATGACCGATACTTACAGTCATGGGATTTAGAAGGCTGGTGCAAGGTTCACACAAAGAGACCTGAGTTTCTTGAGCAGATCCCCAAATCGTTATTTGATTTGATAGACAAGTGTCTAACAGTTAACCCAAGAAATAGGCTCAGTGCTGAAGATGTTCTAAGACATGAATTCTTTGACTCAGTTAATGAGTCCCTGAGGAAGAAAAGGATGATTCATCGTCATCGAGCTCTTGGGTCGGATGACACTGCAGCTTCCAGAGCAATCTGA 2847 0.3822 MAESEFEPNVDLEEKSWHLLALLLRIGHAVYPQRLAAQCRLFAASPNFVCHVGTLPGSPISVTDNGLVTPSVGTVFALGSFFSLHFSPPQPQTYRFRKRKSLFDYGEDGREHKKLAIRDGLREFSFQSFADTTETLMRRNFPVIKFESQNIGSRSFVFPLRIDKNEECSGCPMPNFEHREANNDARTTMSNGEVSESIIKALTKKKSIIKASYLNCLKLVDRNRFMDCNLFVDRALLDPSLCKDGIVNSLGFGKKMDSFGTFMHDYAEQNSIRHVDEDGIGKSNTCKDQPREPNEDDEVESGSQKGLIDSVTNRDKEDVAQRVNAALCREELTNGLEQKNRVHAMNLEKESERNTGTKSTNKIANSSSIPKRLLKSSSILKGGQKNDLHPKSQILKESLASNKFGNVPKNVDQCRNDQKLTARKQNRNENMAGIIATTTKVEKRAYPSFEAFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHSNAHKNHVNNERNMLERFGGKNYIIRYEGSLKNGNSDCFVLEHVDHDRPEVLKKEIDIVQLQWYGYCMFRALYCLHKEGVVHRDVKPGNFLYSRKLSKGYLIDFNLAMVRLLNFLIKSKSKPSLDASSNVISFSSGSAPLVRDKNLGGSKSLPSNKRALADYKNYSELNRNAKEKAYTVHLKNCPDKAGGSFLRAQGTDGSGITSAKDASTRTASAERLREPLPSHGRKELISLVNTMKCANSSTIGPSSQRKRVTAPSSKADDNIFYITPMPLHSSTVGGGLLRSKGDGKKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYLVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDRELSFPVELLNDRYLQSWDLEGWCKVHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHEFFDSVNESLRKKRMIHRHRALGSDDTAASRAI 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01054 948 MobiDBLite consensus disorder prediction 681 696 - -
Gma07g01054 948 ProSiteProfiles Protein kinase domain profile. 452 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01054 948 SMART serkin_6 452 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01054 948 MobiDBLite consensus disorder prediction 273 303 - -
Gma07g01054 948 Gene3D Transferase(Phosphotransferase) domain 1 412 607 - -
Gma07g01054 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Gma07g01054 948 MobiDBLite consensus disorder prediction 273 315 - -
Gma07g01054 948 Coils Coil 639 659 - -
Gma07g01054 948 Pfam Protein kinase domain 776 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01054 948 Pfam Protein kinase domain 454 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01054 948 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 425 924 - -
Gma07g01054 948 SUPERFAMILY Protein kinase-like (PK-like) 442 923 IPR011009 -
Gma07g01054 948 PANTHER CASEIN KINASE-RELATED 425 924 - -
Gma07g01054 948 MobiDBLite consensus disorder prediction 680 702 - -
Gma07g01054 948 Gene3D Transferase(Phosphotransferase) domain 1 688 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01054 Gma-Chr7 12885848 12893186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01054 766 923 Core Cell Cycle Gene Families AT1G76540 29.697 6.52e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Gma07g01054 Pkinase 5.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01054 K02214 - gmx:100795742 1890.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01054 07 12885848 12893186 Gma07g01054 07 12885848 12893186 ECH
Gma03g01028 03 34461425 34468416 Gma07g01054 07 12885848 12893186 GST