Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01037 ATGTTTTCTGCGCCGTCTTCGATCTCCGACAATGGCGACCCAAATGAGCAAGAAGAGAAAGCTGATGGAGTGTTCTTTGTTGAACTGAACGAGGTTCTAACAAGAGAGTTGGCCAAGGACGGTTACTCCGGTGTGGAAGTTAGGGTTACGCCGATGCGCACCAAAATCATAATTAAAGCCACCAAAACCCAAGTTGTTCTCGCTTCGTGTGAGAAGGGAAGGAGAATAAGGGAACTTACCTCTGTGTTTCAGAAGACTGCATCAATGGTTGTGGTAGCAGGAACAGGGGAAGGAGTATTCATCGTGCGAGAGACGAGTCCAGAGAGTGTGAGGAGAGCATTGGAAGAACCTCATAAGGATTTTGAAGGGTCTTCTATATGA 381 0.4698 MFSAPSSISDNGDPNEQEEKADGVFFVELNEVLTRELAKDGYSGVEVRVTPMRTKIIIKATKTQVVLASCEKGRRIRELTSVFQKTASMVVVAGTGEGVFIVRETSPESVRRALEEPHKDFEGSSI 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01037 126 Pfam KH domain 28 86 IPR004044 GO:0003723
Gma07g01037 126 MobiDBLite consensus disorder prediction 1 20 - -
Gma07g01037 126 PANTHER 40S RIBOSOMAL PROTEIN S3-1-RELATED 20 87 - -
Gma07g01037 126 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 22 88 IPR009019 GO:0003723
Gma07g01037 126 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 20 87 - -
Gma07g01037 126 CDD 40S_S3_KH 23 85 - -
Gma07g01037 126 Gene3D - 19 92 IPR015946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01037 Gma-Chr7 12186985 12188692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01037 21 85 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 81.538 3.05e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01037 K02985 - gmx:121175110 186.037