Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01036 ATGGCCACCACAATATCTTGTGATTTCTCTTCAATGGAATCTATTCAACACTATCTTCTTGAGCCTGAACACGATTCCAACGCTCTCATGAACATTTCCAACCACGAAGTTTGCTATTCTGCAACGTACAATGCATTCCCAAGCCCTACGTTCAGCTTGGAGGGTGTCGTCCATGATGCAAACGATTCCTTAGCATGCAAAAGAGAACACCCTAGGGAGGAGCGTGAAGTTCACGCGCCACCGGTATGGAAGCATTACCGGGGTGTGAGGCGTAGGACTTGGGGCAAGTTCGCGGCAGAGATAAGGGATCCAAAGAAGAATGGTGCAAGGATTTGGCTAGGCACTTATGAAACTGAAGAAGCAGCGGGTTTAGCTTATGATAGAGCTGCTTTCAAAATGCGTGGCAGCAAAGCTAAGTTAAATTTTCCTCATCTCATTGGCTCTCACGCGCCTCCGCAGCCAGTGAGAGTGACAAAGGCTTTGAAGCGAAACTCGCCAGAGAAGAGGAAAAATTTGGCTGACTTGTTAAACAGGTTGGCCAAGAATAGAAGCCAAATACTTATACAGGTGCTTGAAATGGGTTTACATGCAAATTATGTCAATGTTGAACAATGGTAG 618 0.4595 MATTISCDFSSMESIQHYLLEPEHDSNALMNISNHEVCYSATYNAFPSPTFSLEGVVHDANDSLACKREHPREEREVHAPPVWKHYRGVRRRTWGKFAAEIRDPKKNGARIWLGTYETEEAAGLAYDRAAFKMRGSKAKLNFPHLIGSHAPPQPVRVTKALKRNSPEKRKNLADLLNRLAKNRSQILIQVLEMGLHANYVNVEQW 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01036 205 SMART rav1_2 85 149 IPR001471 GO:0003700|GO:0006355
Gma07g01036 205 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 1 185 - -
Gma07g01036 205 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Gma07g01036 205 PRINTS Ethylene responsive element binding protein signature 125 145 IPR001471 GO:0003700|GO:0006355
Gma07g01036 205 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700|GO:0006355
Gma07g01036 205 Pfam AP2 domain 85 135 IPR001471 GO:0003700|GO:0006355
Gma07g01036 205 SUPERFAMILY DNA-binding domain 85 144 IPR016177 GO:0003677
Gma07g01036 205 Gene3D AP2/ERF domain 84 144 IPR036955 GO:0003700|GO:0006355
Gma07g01036 205 PANTHER DNA-BINDING DOMAIN 1 185 IPR044808 GO:0003700|GO:0009873
Gma07g01036 205 CDD AP2 84 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01036 Gma-Chr7 12171927 12172638 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01036 5 158 AP2-EREBP Transcription Factor Family AT5G47220 42.077 4.86e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g01036 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01036 K09286 - gmx:100805648 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01036 07 12171927 12172638 Gma07g01036 07 12171927 12172638 ECH
Gma03g01055 03 35249440 35251547 Gma07g01036 07 12171927 12172638 GST
Gma07g01036 07 12171927 12172638 Gma18g02315 18 56982976 56983957 PCT