Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01034 ATGAACAATTTCAACACCACTCTTGAGTCCGATGATTTTGCTCTTCTAGAATCCATTCAACGTTACCTCCTCGACGACAACGAAGACTTCAACTCTCTAACGGAGGTTTTGGCAACACCTAATAATAACGTCAATGCCGTTAACTCTCCATTATCTTCGTTGGGGCATGCAACAACGGCTGCTACAGAGGGGCGTGGGGCTTCGTCTGCAGAGGCGCGTGGTGGCCACGTGCGTAACCAAAATTACAAAGGAGTGAGACGCAGGCCTTGGGGCAAGTTTGCGGCTGAGATAAGGGACCCAAATAGGAACGGCGCGAGAGTGTGGCTTGGGACTTACAATTCGGCTGAGGATGCAGCTTTGGCTTACGATCGAGCCGCTTTTGAAATGCGTGGCTCGAAAGCTAAGCTCAATTTTCCTCATTTAATTGGGTGCAGTGATGCTGAGCCAAGCCGAAGAAGTAATGGCTAA 468 0.4957 MNNFNTTLESDDFALLESIQRYLLDDNEDFNSLTEVLATPNNNVNAVNSPLSSLGHATTAATEGRGASSAEARGGHVRNQNYKGVRRRPWGKFAAEIRDPNRNGARVWLGTYNSAEDAALAYDRAAFEMRGSKAKLNFPHLIGCSDAEPSRRSNG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01034 155 SMART rav1_2 81 145 IPR001471 GO:0003700|GO:0006355
Gma07g01034 155 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 2 151 - -
Gma07g01034 155 Gene3D AP2/ERF domain 80 140 IPR036955 GO:0003700|GO:0006355
Gma07g01034 155 SUPERFAMILY DNA-binding domain 81 140 IPR016177 GO:0003677
Gma07g01034 155 PANTHER DNA-BINDING DOMAIN 2 151 IPR044808 GO:0003700|GO:0009873
Gma07g01034 155 MobiDBLite consensus disorder prediction 55 81 - -
Gma07g01034 155 ProSiteProfiles AP2/ERF domain profile. 81 139 IPR001471 GO:0003700|GO:0006355
Gma07g01034 155 CDD AP2 80 141 IPR001471 GO:0003700|GO:0006355
Gma07g01034 155 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Gma07g01034 155 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Gma07g01034 155 PRINTS Ethylene responsive element binding protein signature 121 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01034 Gma-Chr7 12163225 12163966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01034 24 151 AP2-EREBP Transcription Factor Family AT2G44840 53.435 4.73e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g01034 AP2 1.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01034 K09286 - gmx:100806359 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01034 07 12163225 12163966 Gma07g01034 07 12163225 12163966 ECH
Gma03g01059 03 35300163 35300907 Gma07g01034 07 12163225 12163966 GST