Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01015 ATGATTGATTGTCAGGTTTTGCAATTGCGTAATGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGCAATTCTAACTCGTTCTTTTACTGAGAAAGACTACAAGAAAATAACAGTAGCTACAACAAGGACACTCCAAATGATCAAGAAAGCCAAAGAGCTAGCAATCCTCTGCACTGCACAAGTTGGCCTTGTCATATTCTCCTGCACGAGAAAGCTTTATGAATATGCCAGCACCAGCTTTACAAAGAGGCCTATTGAAGGAAATGCAACAATGAATTAG 294 0.4014 MIDCQVLQLRNDPNPAVREAAILCIEAILTRSFTEKDYKKITVATTRTLQMIKKAKELAILCTAQVGLVIFSCTRKLYEYASTSFTKRPIEGNATMN 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01015 97 ProSiteProfiles MADS-box domain profile. 35 84 IPR002100 GO:0003677|GO:0046983
Gma07g01015 97 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL21 19 91 - -
Gma07g01015 97 PRINTS MADS domain signature 46 61 IPR002100 GO:0003677|GO:0046983
Gma07g01015 97 PRINTS MADS domain signature 61 82 IPR002100 GO:0003677|GO:0046983
Gma07g01015 97 SMART madsneu2 39 83 IPR002100 GO:0003677|GO:0046983
Gma07g01015 97 PANTHER SERUM RESPONSE FACTOR HOMOLOG 19 91 - -
Gma07g01015 97 SUPERFAMILY SRF-like 35 88 IPR036879 GO:0003677|GO:0046983
Gma07g01015 97 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 46 80 IPR002100 GO:0003677|GO:0046983
Gma07g01015 97 Gene3D - 39 93 IPR036879 GO:0003677|GO:0046983
Gma07g01015 97 Pfam HEAT repeat 6 29 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01015 Gma-Chr7 11854963 11855891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01015 45 97 MADS-box Gene Family AT4G37940 50.000 3.04e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Gma07g01015 SRF-TF 7.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01015 K09264 - egr:104419859 60.4622