Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00996 ATGTTGGACTATGAATGGGGGAACCCGTCCACGATAATGCTCACCGGAAATGAAGACAGCTCCGCCGCGGGCTCCGACCAAACCCACCGTCAAATCTTCGACCACTACGCGTCCCACACGCTCATCCCCGACCACTTCCTACACGCGCCAATGCACTCCACCGCCACCACTGCCGCGGCAACCACCGCGGATTTCACCCACCACCACTTCAACCCGCAACCCCACCACCATAACCACATGAACCACCACCACCATCACCACGCCTTCTTCGACCCACGCGCCTTCCATGGCGCGTCGAACACGTCCTACCCCCCACCCCCTTCCATGCTTTCCCTTGACCCACTGCCTCACGTCAACGCTGTTGGGTCTgggcctggacacgggcccgggccaggacccgggccAGGCGGACTTCTCCTTGTCCCCAAGTCTGAAGAAGTCGGTCGGCCCATGGACTTTGTCGGCTCACGAATTGGACTCAATCTCGGAGGACGAACTTACTTCTCGTCCTCTGAGGATGACTTCGTGAGCCGGCTCTACCGTCGGTCTAGGCCCGTGGAACCGGGTTCGACTATCTCGTCGAACTCGCCGCGATGCCAGGCCGAGGGTTGCAATGCTGATCTGTCGCAAGCCAAGCACTATCACCGCCGCCACAAGGTGTGCGAGTTTCACTCCAAAGCCGCCACCGTCATCGCCGCCGGCTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTGTTCCATCTTCTTTCTGAGTTTGATAACGGAAAACGTAGCTGCAGGAAGAGATTGGCAGATCATAATCGCCGCAGAAGAAAAACTCAACAACCAACTCAAGAAATTCAGAAATCTCAGCCTTCTTTGGATAATGTTGCAAGATCTCCACCGGACTCCGGAGCTCAGTCTTCATCGTCGGTGACGGTGGCAGTGTCGCCACCGGATTATTTCCGGCAGAGGCCATACCAAAGCACAAACAACCCTTCATCGATTTCAAGCTCACTGTTTTTCTCAAGCGGGTAG 1020 0.5422 MLDYEWGNPSTIMLTGNEDSSAAGSDQTHRQIFDHYASHTLIPDHFLHAPMHSTATTAAATTADFTHHHFNPQPHHHNHMNHHHHHHAFFDPRAFHGASNTSYPPPPSMLSLDPLPHVNAVGSGPGHGPGPGPGPGGLLLVPKSEEVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVEPGSTISSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRLFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPTQEIQKSQPSLDNVARSPPDSGAQSSSSVTVAVSPPDYFRQRPYQSTNNPSSISSSLFFSSG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00996 339 Gene3D - 189 261 IPR036893 GO:0003677|GO:0005634
Gma07g00996 339 SUPERFAMILY SBT domain 197 278 IPR036893 GO:0003677|GO:0005634
Gma07g00996 339 MobiDBLite consensus disorder prediction 266 339 - -
Gma07g00996 339 MobiDBLite consensus disorder prediction 278 339 - -
Gma07g00996 339 Pfam SBP domain 199 273 IPR004333 GO:0003677
Gma07g00996 339 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 82 322 IPR044817 GO:0003677
Gma07g00996 339 ProSiteProfiles Zinc finger SBP-type profile. 196 274 IPR004333 GO:0003677
Gma07g00996 339 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 82 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00996 Gma-Chr7 11372760 11374969 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00996 1 246 SBP-box Gene Family AT1G02065 42.697 2.49e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma07g00996 SBP 4.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01107 03 36057039 36059369 Gma07g00996 07 11372760 11374969 GST