Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00989 ATGGACTTGTACGGTTCCTTTTCCACCCCTTCAGATTGCTTACATATTGATGATTTTCTAGATTTCTCCAACATCACCACCGACACCCACCACCACCTTCCTCCTCCGCAAAACTCTCCATTAATCTCCCACGACGACGCCAATCTCTTCTTCAATTTCCCTTCCGTTCCGACCGACGAAGCGGCGGAGCTGGAGTGGCTCTCCCAGTTCGTGGACGACGACGCGACGTCGTTTCACAGCTTCCCAGCAACCGCATCGATTGGATCCCACTCGACGTCGTTTCTCTCCAACAATAACAACAGAAACGATAATAACGAATATCCCAAATCTTCATTATCTTCAAACATTCCATGTTCTTCAGCGGTGGCGGGAAAATCGAGAGCGAGGAGGGAAGGGTCGGTTACCGGCGACGGCGGCGTGCGGCGGTGCAGCCACTGTGCCTCGGAGAAGACGCCGCAGTGGCGCGCGGGACCGCTGGGACCGAAGACGCTGTGCAACGCGTGCGGGGTTCGGTTCAAGTCGGGTCGGCTCGTACCCGAATACCGACCCGCGGCGAGCCCTACGTTCGTGCTGACTCAGCATTCGAACTCGCACCGCAAGGTCATGGAGCTCCGTCGCCAGAAGGAGCTGCTCCGCCACCAACAACAACAACAATTACAACAAGAGCAATGCCACCGTCACACTCACAACCACCACGATTTCAAAGTTTGCTGA 714 0.5546 MDLYGSFSTPSDCLHIDDFLDFSNITTDTHHHLPPPQNSPLISHDDANLFFNFPSVPTDEAAELEWLSQFVDDDATSFHSFPATASIGSHSTSFLSNNNNRNDNNEYPKSSLSSNIPCSSAVAGKSRARREGSVTGDGGVRRCSHCASEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLTQHSNSHRKVMELRRQKELLRHQQQQQLQQEQCHRHTHNHHDFKVC 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00989 237 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 141 201 - -
Gma07g00989 237 ProSitePatterns GATA-type zinc finger domain. 143 168 IPR000679 GO:0006355|GO:0043565
Gma07g00989 237 CDD ZnF_GATA 142 189 IPR000679 GO:0006355|GO:0043565
Gma07g00989 237 ProSiteProfiles GATA-type zinc finger domain profile. 141 173 IPR000679 GO:0006355|GO:0043565
Gma07g00989 237 Pfam GATA zinc finger 143 176 IPR000679 GO:0006355|GO:0043565
Gma07g00989 237 PANTHER GATA TRANSCRIPTION FACTOR 2 13 221 - -
Gma07g00989 237 SMART GATA_3 137 187 IPR000679 GO:0006355|GO:0043565
Gma07g00989 237 Coils Coil 201 221 - -
Gma07g00989 237 MobiDBLite consensus disorder prediction 96 121 - -
Gma07g00989 237 MobiDBLite consensus disorder prediction 96 141 - -
Gma07g00989 237 PANTHER GATA TRANSCRIPTION FACTOR 13 221 - -
Gma07g00989 237 Gene3D - 140 187 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00989 Gma-Chr7 11051789 11053588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00989 33 219 C2C2-Gata Transcription Factor Family AT2G45050 52.752 5.85e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma07g00989 GATA 3.7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00989 - - gsj:114418730 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00989 07 11051789 11053588 Gma07g00989 07 11051789 11053588 ECH