Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00975 ATGTTAGCCAATAACTTATCTCCATCGTCAGTTCCCACTTCTGAGCCTTTTCCCTGCACTGAAAATGGCACTGCCACCAATAAAAGGAAGAGAAGGCCCGCAGGAACACCAGATCCGGATGCAGAAGTGGTGTCCCTCTCGCCGAAAACGTTGCTGGAATCGGATCGTTATGTGTGTGAGATCTGCAACCAGGGGTTCCAGAGGGACCAGAACCTTCAGATGCATAGGAGGAGGCACAAGGTGCCATGGAAGCTATTGAAGAGGGAGACACCAGTGGTGAGGAAGAGAGTGTTTGTGTGTCCTGAGCCAACTTGCTTGCACCATGACCCATGTCATGCCTTGGGTGACCTTGTTGGGATAAAGAAGCATTTCAGGAGGAAGCACAGCAATCACAAGCAATGGGTCTGTGAAAGATGCTCCAAAGGCTATGCAGTGCAGTCTGATTACAAAGCACATCTCAAAACGTGTGGCACCCGGGGCCACTCTTGTGATTGTGGCCGCGTTTTCTCAAGGGTTGAGAGTTTCATTGAGCACCAAGATGCTTGCAACATGGGGAGGCTCAGGCCTCATGAATCTCAACCTCTTCAACCATCTGCATGCCTTTCTAGAACAGCTTCAAGCCCAAGTCCTTCAAGTGAGACCAATTTCAGCACAGCTCCATGGCCAACAAGGATGATAATACAAAAGCCATCAGAAACACCCACAATCTTCATGAACAACCCTATTACTGCTATCACCACTGCTGAAACCTCCTCCAAGAGCAACAACAAACTACTCCACCCCAACTTGGATCTTCAACTCTCCACCCCCACCAATAACAACAACTCCAACACCTCCAACACCAACACATCAAATATTGCAAACCCCATTGATAATGCTGCAATATCAGCTAAGAGGGATCATTATCATGAGAACCATTCAACCCATTTGCAACTCTCAATTGGGTCATCAGATATGAGTGAGAAGAATGATCAATCAAACAGGAACTCATCAGAGAAGAGCAGCAATAACAGCAACAACATTAATGATCAGAATAATAAGCAGCAGTCCAACAACATGGCCTTGTTGAGGGTTCAAGAGCAAGCAAGGGAGCACTTGAGGATAGCCATGGCAGAGAAAGCATATGCTGAGGAAGCAAGGAAGCAAGCAAAGAGGCAGATTGAGCTTGCGGAGCAAGAGTTCACAAACGCCAAGAGGATAAGACAACAAGCACAAGTGGAACTAGACAAGGCCTACGCTTTGAAAGAACATGCAATGAAGCAAATCAACTCCACCATGCTCCAAATCACTTGCCACTCTTGCAAACAACAGTTCCAAGCTCGAAATGCAACCACCACCAGCCCCGACGATAATTCTTTGGTGCTGAGCTACGTTTCTTCTGCTATTACCACGGAAGGAGGAGAAGTTGAAAACGATAATATTGCAAAAGATCATGCCAAAGACAACAACTAA 1452 0.4669 MLANNLSPSSVPTSEPFPCTENGTATNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLRPHESQPLQPSACLSRTASSPSPSSETNFSTAPWPTRMIIQKPSETPTIFMNNPITAITTAETSSKSNNKLLHPNLDLQLSTPTNNNNSNTSNTNTSNIANPIDNAAISAKRDHYHENHSTHLQLSIGSSDMSEKNDQSNRNSSEKSSNNSNNINDQNNKQQSNNMALLRVQEQAREHLRIAMAEKAYAEEARKQAKRQIELAEQEFTNAKRIRQQAQVELDKAYALKEHAMKQINSTMLQITCHSCKQQFQARNATTTSPDDNSLVLSYVSSAITTEGGEVENDNIAKDHAKDNN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00975 483 PANTHER PROTEIN INDETERMINATE-DOMAIN 16-LIKE 1 466 - -
Gma07g00975 483 MobiDBLite consensus disorder prediction 195 222 - -
Gma07g00975 483 MobiDBLite consensus disorder prediction 308 348 - -
Gma07g00975 483 SUPERFAMILY beta-beta-alpha zinc fingers 56 154 IPR036236 -
Gma07g00975 483 Gene3D Classic Zinc Finger 45 130 - -
Gma07g00975 483 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Gma07g00975 483 MobiDBLite consensus disorder prediction 1 24 - -
Gma07g00975 483 Pfam Zinc finger, C2H2 type 57 79 IPR013087 -
Gma07g00975 483 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Gma07g00975 483 PANTHER OS03G0310200 PROTEIN 1 466 IPR039288 GO:0009630
Gma07g00975 483 MobiDBLite consensus disorder prediction 187 222 - -
Gma07g00975 483 MobiDBLite consensus disorder prediction 1 44 - -
Gma07g00975 483 MobiDBLite consensus disorder prediction 263 288 - -
Gma07g00975 483 Coils Coil 366 407 - -
Gma07g00975 483 MobiDBLite consensus disorder prediction 300 348 - -
Gma07g00975 483 SMART c2h2final6 57 79 IPR013087 -
Gma07g00975 483 SMART c2h2final6 98 128 IPR013087 -
Gma07g00975 483 SMART c2h2final6 134 161 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00975 Gma-Chr7 10816309 10819730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00975 20 471 C2H2 Transcription Factor Family AT2G01940 53.261 2.13e-143 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma07g00975 zf-C2H2 0.0046 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00975 K25871 - gmx:100785333 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00975 07 10816309 10819730 Gma09g01597 09 41260331 41263406 GST
Gma05g02405 05 44815939 44817448 Gma07g00975 07 10816309 10819730 PCT
Gma08g00543 08 4442994 4444840 Gma07g00975 07 10816309 10819730 PCT
Gma07g00975 07 10816309 10819730 Gma05g02405 05 44815939 44817448 PCT
Gma07g00975 07 10816309 10819730 Gma08g00543 08 4442994 4444840 PCT