Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00972 ATGGAGAACTCATCATCTTCAAACTATCTCTACCGAGAGTGCCTCCGCAACCATGCAGCCAGCCTAGGCAGCTATGCCACGGATGGCTGCGGGGAGTTCACCCTCGACGCGGATAGCGTCTCGTCCCCTTCTCTCCAGTGCATGGCCTGCGGTTGCCATCGCAACTTCCACCGCAAGGTCACGTGCCCTGTGGTGGAAGGGCCGCAGGTCGTGACTGGAGGGAGCGGGGACATGATGGAGTATTCAGGAGGGGAGGGAAGAATGGAGATGGGAGAGAGGAGTGGTGGAGGAAGCAGCAAGAAGAGGTTCAGGACGAAGTTTAGCGCTGAGCAGAAGGAGAAGATGTTGGGGTTTGCGGAGAAGCTAGGGTGGAAGCTGCAGAGGAAAGAGGTGGATGATGAGATTGAGAGGTTCTGTAAGAGTGTGGGAGTCACTAGACAAGTTTTCAAGGTGTGGATGCATAACCACAAGAACAATTCTAACTCTTCTACTAATTCTTCTGTTAATCTCTCTTCTCTCACTCAGTCATGA 531 0.5311 MENSSSSNYLYRECLRNHAASLGSYATDGCGEFTLDADSVSSPSLQCMACGCHRNFHRKVTCPVVEGPQVVTGGSGDMMEYSGGEGRMEMGERSGGGSSKKRFRTKFSAEQKEKMLGFAEKLGWKLQRKEVDDEIERFCKSVGVTRQVFKVWMHNHKNNSNSSTNSSVNLSSLTQS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00972 176 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 1 166 - -
Gma07g00972 176 MobiDBLite consensus disorder prediction 156 176 - -
Gma07g00972 176 Gene3D - 85 164 - -
Gma07g00972 176 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 11 60 IPR006456 -
Gma07g00972 176 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 166 - -
Gma07g00972 176 SUPERFAMILY Homeodomain-like 91 159 IPR009057 -
Gma07g00972 176 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 11 59 IPR006456 -
Gma07g00972 176 Pfam ZF-HD protein dimerisation region 9 61 IPR006456 -
Gma07g00972 176 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 100 158 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00972 Gma-Chr7 10778504 10779034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00972 11 158 ZF-HD Transcription Factor Family AT4G24660 43.452 1.07e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma07g00972 ZF-HD_dimer 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00972 - - gmx:547766 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00972 07 10778504 10779034 Gma09g01600 09 41303976 41304707 GST
Gma05g02404 05 44804027 44804485 Gma07g00972 07 10778504 10779034 PCT
Gma08g00542 08 4432820 4433278 Gma07g00972 07 10778504 10779034 PCT
Gma07g00972 07 10778504 10779034 Gma05g02404 05 44804027 44804485 PCT
Gma07g00972 07 10778504 10779034 Gma08g00542 08 4432820 4433278 PCT