Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00945 ATGACGAGTTCAAGCGTGAAGAATGAAGATGAAGAGAAGGGACACAATAGTCACAACAGCAACAAGCGCATCATCGAAGTGTCTTTTCTCCCTTCTTTCCCTCACTTTCAGGAAGATTACAGAGATATGAGTTCTCAAATTCGGAGAGAAAGAAGGGAATGGTCCAGGGTTCCACCACAAGGTGCTACTCGTCAAGAATGGGTCCCCAGAGGGGCTGCTGCTGCTGCTGCGTCCACCAATGTCGCTCAGCCATCAAATTTGCATTCAAACAACAATGCtgatgctggttcttccaatctaggggtggctgttgctgctccgtccgtgagtcgcagtagaagcaacaatcatgggaatgatgttggttcttccaatcaaggggtggctgttgctgctctgccggtcagtcggggtagaagcaacaatcatgggaatgatgccgggttttccaatcaaggggtggctgttgctgctctgccggtgagtcacggtagaagcaacaatcatggaaatgatgccgggccttccaatcaaggggtggctgttgcttctccgccggtgagtcacggtagaagcaacaatcctgggaatggtgctggttcttccaatcaaggtttggcagttgctgctccgccggtgaatcgtggtagaagcaaaaatcatgggaaagattctgtctcttccaatcaaggggtggctgttgctgcactggggagtcgtggtagaagcaacaatcatgggaGTCATTGGATGGAAATGGAAAAGGATAAGGGGAGCAGGAGTGGGAGTCAGGTGGAGAAGGGATTGAGAGTGGGAGTCAGAGACTCTAGTTTGCCTCAATTGGTGCAAGAGATTCAGGAGAAGCTCATGAAAGGTACCGTGGAGTGCATGATTTGCTATGAGATGGTCCAGAGGTCTGTGCCGGTTTGGTCTTGCTCCAGCTGTTACTCTATCTTTCACCTGAACTGCATCAAGAAGTGGGCTAGGGCACCAATCTCAAGTGATTTGTCCTTGTCCGTGGAGAAGAATCACGAGCTTAATTGGCGGTGTCCTGGTTGTCAGTCTGTGAAATTTACCTCTTCAAAGGAGATTAGATATGTTTGCTTTTGTGGAAAGAGGATAGACCCTCCATCTGATTTGTATCTGACACCACATTCATGTGGAGAACCATGTGGGAAGCCTCTTCAGAGGGAGGTGTTGGTTCCTGGAGGGAATAGGGATGATCTTTGCCCTCATGCTTGTGTCTTGCAATGCCATCCAGGACCATGCCCTCCCTGTAAAGCATTTGCTCCTCCGCGGTTGTGCCCTTGTGGGAAGAAAAATATTACCACCCGATGCTCTGATCGGCAGTCTGTTCTTACCTGTGGGCAGTGCTGTGGTAAACTTCTTGAATGTGGGCGCCATCGCTGTGAACGCATTTGTCATGTGGGTTCATGTGATCCTTGTAAGGTTCCAAGCAGTGCAACTTGCTTTTGCAGTAAAAATACGGAGGTTGTTCTTTGTGGGGACATGACTGTGAAGGGTGAAATTGAAGCAAAAGGTGGGGTTTTTTCTTGTAGTTCCTATTGTCTAAAGATACTTGGTTGTGGTAATCATGTCTGTAGTGAGATTTGTCATCCAGGAAGCTGTGTGGAATGTGAATTGTTACCTAGCCGGGTTAAGACATGCTGTTGTGGGAAAACAAGGTTGGAGAATGAACGCCAGAGTTGTTTGGATCCGATACCTACCTGCTCGAAAGTATGTGGCAAGCTGCTTCATTGTGGCATGCATAGTTGTAAAGAGGCATGCCATGTTGGGGAGTGTCCACCTTGTTTGGTTGAAGTTTCACAGAAGTGCTGTTGTGGCTCAACTTCCCGAACTGTGGAGTGCTATAAGACTATGATGGAGAATGAGAAATTTATGTGTGAAAAGTCTTGTGGGATAAAAAAGAATTGTGGAAGGCATCGATGTAGTGAAAGGTGTTGTCCATTTTCTAATTCAAATCATTATAATACCTTTAGTGGGGATTGGGTTCCTCACTTTTGTTCCATGCCATGTGGAAAGAAGCTAAGGTGTGGCCAGCATGTGTGTGAATGTCTGTGTCACAGTGGTCATTGTCCACCTTGTTTCCAAACAATCTTTAATGAATTGGCTTGTGCTTGTGGTAGGACTTCAATACCTCCTCCTCTACCATGTGGTACACCGCCTCCCTCATGTCAGCTTCCATGCTCAGTTCCTCAGCCATGTGGTCATTCAGTCTCACACAGTTGCCATTTTGGAGACTGTCCTCCTTGTTCAGTGCCTGTTGCAAAAGAATGTATTGGCGGGCATGTAGTTCTTAGAAACATACCTTGTGGTTCGAAGGATATTAGATGCAATCATCCCTGTGGGAAGACCAGGCAGTGTGGTTTACATGCATGTGGCAGAACATGTCACCCTCCACCTTGTGATAATCTATCTGGTGTTGTGCAAGGTTTCAAAGCACCATGTGGCCAAACATGTGGTGCTCCAAGAAGAAGCTGCAGGCACACATGTATGGCTCCTTGTCACCCTTCATCTCCATGCCCAGATATAAGGTGTGAATTCCCTGTTACAATCACTTGCTCTTGTGGCCGTATAACGGCAAATGTTCCTTGTGATGTTGGTGGTAGCAGTAGCAATTATAATGCTGATGCCATACATGAAGCTTCCATTATTCAAACATTGCCTGTACCTCTTCAACCAGTTGATGCAAATGGCAAGAAAGTTCCCCTAGGACAAAGAAAGCTGATATGTGATGATGAATGTTCTAAGCTGGAACGCAAAAGGGTTCTCGCGGATGCTTTTGACATTACTGCTCCAAATCTGGACTCTCTCCATTTTGGTGATAACTCTCTTTCTTCTGAATTGCTTTTAGATTTTTTCAGGCGTGAGCCAAAATGGGTTTTAGCTGTTGAGGAGAGATGCAAAATTTTAGTACTTGGCAAGACTAGAGGAACAGGAACTACACATGGTTTAAAAGTCCACATCTTTTGTCCCATGCTGAAGGAAAAAAGAGATGCAGTGAGGTTGATTGCTGATAGATGGAAGCTTGCAATCACTGCTGCCGGCTGGGAGCCAAAGCGATTTATTGTAATTTCTGTTACCCCAAAATCAAAGGCCCCGGCTCGTGTGATAGGGGTTAAGGGTACTACAACTTTAAATGTGCCTCTTCCTCCTGTATTTGATCCGTTGGTTGACATGGACCTGCGACTTGTTGTCTCATTTCCAGACTTACCAAGGGATACTGAAATTAATTCCTTGGTTTTGAGGTTTGGTGGCGAGTGTGAGCTTGTTTGGTTGAACGACAAGAATGCTTTGGCTGTTTTTCATGATCCTGCTCGAGCTGCAACTGCGATGAGGAGGTTGGATTATGCAACAGTTTATCAGGGAGCTGTTTTGGTTGCCCCGAATGCTGGGGCATTGGTGGCATCTTCAGCTACCAATGCCTGGGGAGGAGCTGGGGCAATGAAAGGAGGAGGAGCGCTGCCAGCATTGAAAGGTAACTCATGGAAAAAGGCTGTGGCTCAAGACTCTGGTTGGGAAGATTCTTGGGGTGGTGAAGAGTGGATTGCTGGTTCTGTGAATATCCAGCCATCTGTTTGGAAAAAGGAAGCACCTCTGGCTGCTTCTTTGAATCGTTGGAATGTCTTGGAGCAGGAATCGAGTTCAAGTTTGTCGTCTACAACTGTTAGAGCTGAAGTTTCTGGGAAGAAAACTGAAAATGCTGGTGAAGAAGGTGGCTCAAAGGAAGAGGAAAAGTTGGATGCAGCTTCTGAAGTAGTTGATGATTGGGAGAAGGCTTATGAATGA 3810 0.4021 MTSSSVKNEDEEKGHNSHNSNKRIIEVSFLPSFPHFQEDYRDMSSQIRRERREWSRVPPQGATRQEWVPRGAAAAAASTNVAQPSNLHSNNNADAGSSNLGVAVAAPSVSRSRSNNHGNDVGSSNQGVAVAALPVSRGRSNNHGNDAGFSNQGVAVAALPVSHGRSNNHGNDAGPSNQGVAVASPPVSHGRSNNPGNGAGSSNQGLAVAAPPVNRGRSKNHGKDSVSSNQGVAVAALGSRGRSNNHGSHWMEMEKDKGSRSGSQVEKGLRVGVRDSSLPQLVQEIQEKLMKGTVECMICYEMVQRSVPVWSCSSCYSIFHLNCIKKWARAPISSDLSLSVEKNHELNWRCPGCQSVKFTSSKEIRYVCFCGKRIDPPSDLYLTPHSCGEPCGKPLQREVLVPGGNRDDLCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKNITTRCSDRQSVLTCGQCCGKLLECGRHRCERICHVGSCDPCKVPSSATCFCSKNTEVVLCGDMTVKGEIEAKGGVFSCSSYCLKILGCGNHVCSEICHPGSCVECELLPSRVKTCCCGKTRLENERQSCLDPIPTCSKVCGKLLHCGMHSCKEACHVGECPPCLVEVSQKCCCGSTSRTVECYKTMMENEKFMCEKSCGIKKNCGRHRCSERCCPFSNSNHYNTFSGDWVPHFCSMPCGKKLRCGQHVCECLCHSGHCPPCFQTIFNELACACGRTSIPPPLPCGTPPPSCQLPCSVPQPCGHSVSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNHPCGKTRQCGLHACGRTCHPPPCDNLSGVVQGFKAPCGQTCGAPRRSCRHTCMAPCHPSSPCPDIRCEFPVTITCSCGRITANVPCDVGGSSSNYNADAIHEASIIQTLPVPLQPVDANGKKVPLGQRKLICDDECSKLERKRVLADAFDITAPNLDSLHFGDNSLSSELLLDFFRREPKWVLAVEERCKILVLGKTRGTGTTHGLKVHIFCPMLKEKRDAVRLIADRWKLAITAAGWEPKRFIVISVTPKSKAPARVIGVKGTTTLNVPLPPVFDPLVDMDLRLVVSFPDLPRDTEINSLVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDYATVYQGAVLVAPNAGALVASSATNAWGGAGAMKGGGALPALKGNSWKKAVAQDSGWEDSWGGEEWIAGSVNIQPSVWKKEAPLAASLNRWNVLEQESSSSLSSTTVRAEVSGKKTENAGEEGGSKEEEKLDAASEVVDDWEKAYE 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00945 1269 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 271 1242 - -
Gma07g00945 1269 CDD NF-X1-zinc-finger 577 625 - -
Gma07g00945 1269 SMART znfxneu3 410 428 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 SMART znfxneu3 529 548 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 SMART znfxneu3 742 760 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 SMART znfxneu3 685 704 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 SMART znfxneu3 587 606 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 SMART znfxneu3 834 855 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 SMART znfxneu3 465 484 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 SMART znfxneu3 795 825 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 CDD NF-X1-zinc-finger 455 503 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 1 23 - -
Gma07g00945 1269 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 271 1242 IPR034078 GO:0003700
Gma07g00945 1269 ProSiteProfiles Zinc finger PHD-type profile. 293 356 IPR019787 -
Gma07g00945 1269 CDD NF-X1-zinc-finger 785 843 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 164 208 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 247 263 - -
Gma07g00945 1269 ProSiteProfiles Zinc finger RING-type profile. 296 354 IPR001841 -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 162 264 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 1219 1269 - -
Gma07g00945 1269 CDD NF-X1-zinc-finger 732 780 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 1237 1269 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 1219 1235 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 1 20 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 78 127 - -
Gma07g00945 1269 CDD NF-X1-zinc-finger 823 872 - -
Gma07g00945 1269 MobiDBLite consensus disorder prediction 50 127 - -
Gma07g00945 1269 Pfam NF-X1 type zinc finger 685 702 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 465 483 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 645 656 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 412 427 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 742 759 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 827 852 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 587 604 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 529 546 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 Pfam NF-X1 type zinc finger 795 810 IPR000967 GO:0005634|GO:0008270
Gma07g00945 1269 CDD NF-X1-zinc-finger 675 718 - -
Gma07g00945 1269 CDD RING-CH-C4HC3_NFX1 295 354 - -
Gma07g00945 1269 CDD NF-X1-zinc-finger 387 448 - -
Gma07g00945 1269 CDD NF-X1-zinc-finger 519 564 - -
Gma07g00945 1269 SUPERFAMILY RING/U-box 286 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00945 Gma-Chr7 10448458 10454004 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Gma07g00945 zf-NF-X1 18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00945 K12236 - gmx:100789059 2533.06