Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00930 ATGCAACAACATTCTCAGACCCTCTTCGCCACCTTCACCATAATCTTCTTTGCCTTCTTCTTCCCTTCAACATTCTCCGACATCTCATCGGAGCGCGCGGCGCTGCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACCCTCCTCTGGAACGCCACCGCCCCCTCGCCGTGCGCCTGGCCCGGCGTCCAATGCGACGTCGCTAACGCCAGCGTCGTCGAGCTCCACCTCCCCGCCGTCGCACTCTCCGGCGAGCTCCCCGCCGGCGTGTTCCCGGCGCTCAAGAACCTCCACACGCTCAGCCTCCGCGTGAACTCCCTCTCCGGCACCCTCCCCGCCGACCTCTCCGCCTGCACCGCCCTCCGCAACCTCTTCCTCCAGCAGAACCACTTCTCCGGCGAGGTTCCGGCGTTCCTTTCCGGCATGACCGGCCTCGTCCGCCTCAATTTGGCCTCCAACAACTTTTCCGGTCCAATTCCGGCCCGGTTCGGGAACCTCACGCGGTTGAGGACCCTCTTCCTTGAGAACAACCGGTTCAACGGTTCGCTTCCAAGTTTTGAAGAACTCAATGAATTAGCTCAGTTCAATGTCTCTTACAACATGTTAAACGGTACTGTGCCCAAAAAGTTGCAAACTTTTGATGAAGATTCGTTTTTGGGGAATACCCTTTGTGGGAAACCTCTAGCAATTTGTCCCTGGGATGATGGGGGTGGTGAGAGTGGTGTAAATGGGAGTTCAAATTCAAGTGGGGTTGGAGGGGGTGAAGGGAGTGTGATTGGAGGGGAGAAGAAGAAGAAGGGAAAGCTTTCTGGGGGTGCAATTGCTGGGATTGTTGTTGGGAGTGTGGTGATTCTTTTGTTGGTTGTCTTTGCTTTGATTCTCTTGTGTAGAAGTGGGGACAAGACTAGGAGTGTTGATAATGTTAATAACATTGTGGGGTTGAAGGAGGAGCAGCAACTGCATGGAGAGGTAGGAATTGAGAGAGGCAATGTGGAGAATGGTGGTGGAGGGGGAGGTGGGAATTCGGTGGTGGCGGCAGCAACAGCGGTGGCAGCAGTGAGTGGCAGCAGGGGTGGTGGTGGTGGTGGTGGAGGAAGAGGAGATAAGAAGTTGGTGTTTTATGGTAATAAAGTGAAGGTGTTTGATTTGGAGGATTTGCTGAGGGCTTCTGCTGAGGTGTTGGGGAAAGGAACTTTTGGGACTACCTATAAGGCGGTTATGGAGGATGGGCCCGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACTGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGTGGTGGGAGTGATGGATCATGAGAATTTGGTGCCTCTCAGGGCTTACTACTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGGAAACAAAGGAGCTGGTAGGACACCATTGAATTGGGAAATGAGATCAAGCATTGCACTAGGAGCTGCTCGCGGCATCGAGTACCTACATTCACAAGGGCCTAGTGTTTCTCATGGAAACATAAAGTCCTCCAACATCCTCCTAACCAAGTCCTATGATGCTAGGGTATCTGATTTTGGCCTCACACACCTTGTTGGCTCTTCATCCACGCCCAACAGGGTTGCCGGCTACCGCGCTCCCGAAGTAACCGATCCGCGCAAAGTTTCTCAGAAGGCTGATGTATACAGCTTTGGAGTGTTGCTCTTGGAACTTCTCACAGGAAAGGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTGCAATCAGTTGTTAGAGAAGAGTGGAGTTCTGAGGTGTTTGATATTGAACTCCTTAGGTATCAGAATTCAGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTAGTTCCATACCCTGATAACCGCCCTTCAATGTCTCAAGTGAGACAACGCATAGAAGAGTTACGTAGGCCTAGCATGAAAGAGGGTACTCAAGACCAAATCCAACAACCTGATTTGATCAATGATATAGATGATGTGTCTTCTAGATGA 2055 0.5187 MQQHSQTLFATFTIIFFAFFFPSTFSDISSERAALLALRSAVRGRTLLWNATAPSPCAWPGVQCDVANASVVELHLPAVALSGELPAGVFPALKNLHTLSLRVNSLSGTLPADLSACTALRNLFLQQNHFSGEVPAFLSGMTGLVRLNLASNNFSGPIPARFGNLTRLRTLFLENNRFNGSLPSFEELNELAQFNVSYNMLNGTVPKKLQTFDEDSFLGNTLCGKPLAICPWDDGGGESGVNGSSNSSGVGGGEGSVIGGEKKKKGKLSGGAIAGIVVGSVVILLLVVFALILLCRSGDKTRSVDNVNNIVGLKEEQQLHGEVGIERGNVENGGGGGGGNSVVAAATAVAAVSGSRGGGGGGGGRGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVMEDGPVVAVKRLKDVTVSEKEFKEKIDVVGVMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSSIALGAARGIEYLHSQGPSVSHGNIKSSNILLTKSYDARVSDFGLTHLVGSSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSMSQVRQRIEELRRPSMKEGTQDQIQQPDLINDIDDVSSR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00930 684 CDD STKc_IRAK 393 656 - -
Gma07g00930 684 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Gma07g00930 684 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 684 - -
Gma07g00930 684 ProSiteProfiles Protein kinase domain profile. 387 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00930 684 Gene3D Phosphorylase Kinase; domain 1 366 461 - -
Gma07g00930 684 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
Gma07g00930 684 MobiDBLite consensus disorder prediction 663 684 - -
Gma07g00930 684 Pfam Protein kinase domain 390 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00930 684 PANTHER OS05G0588300 PROTEIN 1 684 - -
Gma07g00930 684 MobiDBLite consensus disorder prediction 656 684 - -
Gma07g00930 684 Gene3D Transferase(Phosphotransferase) domain 1 462 680 - -
Gma07g00930 684 Gene3D Ribonuclease Inhibitor 184 231 IPR032675 -
Gma07g00930 684 SUPERFAMILY Protein kinase-like (PK-like) 391 653 IPR011009 -
Gma07g00930 684 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Gma07g00930 684 SUPERFAMILY L domain-like 49 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00930 Gma-Chr7 10246447 10248975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00930 27 673 Receptor kinase-like Gene Family AT1G48480 58.129 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma07g00930 Pkinase 4.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00930 - - gmx:100781597 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00930 07 10246447 10248975 Gma09g01625 09 41604198 41606719 GST
Gma05g02395 05 44747677 44749986 Gma07g00930 07 10246447 10248975 PCT
Gma08g00534 08 4371761 4374541 Gma07g00930 07 10246447 10248975 PCT
Gma07g00930 07 10246447 10248975 Gma05g02395 05 44747677 44749986 PCT
Gma07g00930 07 10246447 10248975 Gma08g00534 08 4371761 4374541 PCT