Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00912 ATGGAGCCTTCCTCGATCTCTCCACCGCCAGCTCCGCCTGCCACCGCCGTCCCCTTCCCGGCCGAACCCAACGACCACCTTCCACCACCCATTTCCGAACCACCTTCCAACCATCCACCCTACGCCGAGATGATATACACGGCAATCGAGGCGCTGAAGGAGAAAGAGGGTTCAAGCAAGAGGGCCATAGCGAAGTATATTGAGCAAGTGTACAAGGAACACCTCCCACCGAATCACTCCATCTTGTTGACTCAGCACTTAACTCTCTTGAAGAGCAGCGGAATGCTCCAAATGGTCAAAAAATCCTATGCGCTCCCTAGATCTGTGCCTCTTACCGGAGCTGCACCCGCACAAGCGCATGATGCCGCCACCTCTGCTCTGCAGTTGACTTCCCCGAGGCCTAGAGGCCGGCCTCGCAAGGCTCAAATTCCGGTCCAAAACTTACCTCAGGACATTAATGTGCAGGTTCAGCAGAATGCCGAGCCCGTCTGGGCCGCGCTCGGACTTGCAGATGAGCCCGTGCAGACAGAAGGCAGCAGCAAGAAGCGGGGCCGTCCGAAGAAGAGTGTCACTCCCGGAGCAGGTCCGGCAAAGAGAGGACGTCCTCCCGGTTCTGGGAAAAGGTTGGGCCGTCCTCCCAAGGAGAAGTCTGTCACTGCAACAACAACAACGGATGTCTCTGGGCCCAAGAGACGCCCGGGCCGCCCGCCCAAGAATCAGTCTCAGCCAACTCCCATTCCCTTTGCTCCGGCGGATGCAGCCGCTGCCGTGGGTACAGAGTATGTTGCAGCCGCTGAAACTGTGCCGGTTGATGCTGCGGCTGCTCTGGGGCCTAGAGCTCGTGGACGACCGAAGAAATACGCTGATGAGATGGTTGCTGCAGGCCGAGGTAGGGGACGAGGCCGTGGACGTGGTGGCGGCGGCGGAAGAGGACGAGGGAGAGGACGCGGTCAATTGCCTGCGCAGCTCAGAAAATCAGGGGCAAGACCCGTGGGTCGTCCGAAGAAGGGGTCAACTTCTGCTAGTACTTCTCAAAATGCTGCTAATGAAGATCTCAGGAGGAAGCTTGAACACTTTCAATCAAAAGTCAAGGAATCTCTTGCAGTTCTTAAGCCTCATTTTAACCATGAAAGTCCAGTCACTGCAATTGCTGCCATTCAAGAGTTAGAAGTACTGGGAACTATGGACCTCAATGCACCACTAAGGGATGAAACACTTCCATCGCAAGAGGAGCAGCCACCACTGCAGcagcagcagcagccaccgcagcaacagttcccaccaccacaacagcagccaccacagcaacaCCTAGCACCACAACAACTGCCGCCACAGCCACAGGCACCAATATTTCAGCAAACATATCCTCCATTTCATCTGCCGCAGTTCCACCATCACCAGCCGACGCTGCAGTTCCAGCAGCAGCCACAGCCGCCACAGCTATTCCAGCATCAGGCACAGCCACCTTCCCACCAACAGTTTCATCCTTAG 1494 0.5402 MEPSSISPPPAPPATAVPFPAEPNDHLPPPISEPPSNHPPYAEMIYTAIEALKEKEGSSKRAIAKYIEQVYKEHLPPNHSILLTQHLTLLKSSGMLQMVKKSYALPRSVPLTGAAPAQAHDAATSALQLTSPRPRGRPRKAQIPVQNLPQDINVQVQQNAEPVWAALGLADEPVQTEGSSKKRGRPKKSVTPGAGPAKRGRPPGSGKRLGRPPKEKSVTATTTTDVSGPKRRPGRPPKNQSQPTPIPFAPADAAAAVGTEYVAAAETVPVDAAAALGPRARGRPKKYADEMVAAGRGRGRGRGRGGGGGRGRGRGRGQLPAQLRKSGARPVGRPKKGSTSASTSQNAANEDLRRKLEHFQSKVKESLAVLKPHFNHESPVTAIAAIQELEVLGTMDLNAPLRDETLPSQEEQPPLQQQQQPPQQQFPPPQQQPPQQHLAPQQLPPQPQAPIFQQTYPPFHLPQFHHHQPTLQFQQQPQPPQLFQHQAQPPSHQQFHP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00912 497 MobiDBLite consensus disorder prediction 1 40 - -
Gma07g00912 497 MobiDBLite consensus disorder prediction 420 452 - -
Gma07g00912 497 Gene3D - 33 118 IPR036388 -
Gma07g00912 497 SMART AT_hook_2 328 340 IPR017956 GO:0003677
Gma07g00912 497 SMART AT_hook_2 180 192 IPR017956 GO:0003677
Gma07g00912 497 SMART AT_hook_2 132 144 IPR017956 GO:0003677
Gma07g00912 497 SMART AT_hook_2 278 290 IPR017956 GO:0003677
Gma07g00912 497 SMART AT_hook_2 230 242 IPR017956 GO:0003677
Gma07g00912 497 MobiDBLite consensus disorder prediction 1 37 - -
Gma07g00912 497 Pfam linker histone H1 and H5 family 38 100 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma07g00912 497 PANTHER HISTONE H1 308 408 - -
Gma07g00912 497 SMART h15plus2 35 102 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma07g00912 497 PANTHER HISTONE H1-LIKE 9 304 - -
Gma07g00912 497 PANTHER HISTONE H1-LIKE 308 408 - -
Gma07g00912 497 MobiDBLite consensus disorder prediction 171 251 - -
Gma07g00912 497 PRINTS AT-hook-like domain signature 132 142 IPR017956 GO:0003677
Gma07g00912 497 PRINTS AT-hook-like domain signature 228 239 IPR017956 GO:0003677
Gma07g00912 497 PRINTS AT-hook-like domain signature 276 286 IPR017956 GO:0003677
Gma07g00912 497 MobiDBLite consensus disorder prediction 467 497 - -
Gma07g00912 497 MobiDBLite consensus disorder prediction 267 357 - -
Gma07g00912 497 CDD H15 35 104 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma07g00912 497 Coils Coil 349 369 - -
Gma07g00912 497 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 37 107 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma07g00912 497 MobiDBLite consensus disorder prediction 116 148 - -
Gma07g00912 497 PRINTS Histone H5 signature 24 45 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gma07g00912 497 PRINTS Histone H5 signature 51 68 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gma07g00912 497 PRINTS Histone H5 signature 127 141 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gma07g00912 497 MobiDBLite consensus disorder prediction 400 497 - -
Gma07g00912 497 PANTHER HISTONE H1 9 304 - -
Gma07g00912 497 MobiDBLite consensus disorder prediction 282 297 - -
Gma07g00912 497 SUPERFAMILY "Winged helix" DNA-binding domain 34 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00912 Gma-Chr7 9982661 9988255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00912 44 112 Single Myb Histone (SMH) Gene Family AT1G49950 43.478 7.67e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00912 - - gmx:100788215 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00912 07 9982661 9988255 Gma09g01645 09 41936027 41942524 GST