Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00902 ATGGCAGAACTCGATCTGTCCAAGAAAGTAGCCGATAGGTATCTCAAGCGTGAAGTCCTTGGTGAGGGTACATACGGTGTCGTTTACAAAGCCATTGATACCAAGacaGGGCAGACGGTTGCAATTAAGAAGATCCGGCTTGGCAAGCAGAAAGAAGGGGTCAATTTTACGGCTCTCAGAGAAATTAAACTGCTTAAAGAGCTCAAAGATCCAAACATTATTGAGTTGATTGATGCCTTTCCACATAAAGGGAATTTGCATCTTGTGTTTGAGTTCATGGAGACGGACCTCGAAGCTGTTATACGGGACAGGAATATTGTTCTTTCACCTAGTGATATAAAATCTTACCTTCAGATGACATTAAAAGGCCTTGCTATTTGCCACAAGAAATGGGTGTTGCATAGGGATATGAAGCCAAATAACTTGTTGATAGGATCCAACGGACAGCTGAAACTTGCAGATTTTGGTTTAGCACGGGTATTTGGAAGCCCAGATCGCAGGTTCACTCATCAGGTGTTTGCTCGGTGGTATAGAGCACCTGAGCTATTATTTGGCACCAAGCAGTATGGTCCTGGGGTAGATGTTTGGGCTGCAGCTTGTATATTTGCTGAACTTCTTCTTCGTCGACCCTTCCTGCAGggttcaagtgatattgatcaattaggaaagatttttgcagcatttGGAACTCCATCTGCTTCTCAGTGGCCTGATATGATTTTCCTTCCTGATTATGTTGAATATCAACATGTTCCTGCCCCACCTTTGCGTTCTTTATTTCCAATGGCTAGTGACGATGCCTTAGATTTGTTGTCAAAGATGTTTACTTATGATCCAAAGGCTAGAATATCTGTACCGCAGGCATTAGAGCACAGGTACTTCTCATCTGCGCCTCTGCCCACAGATCCTGTTAAGCTTTCAAGACCTGCTCCTAAGAAGGAATCTAAGGTTTCAGATGTAATTTCAAACGAAGGTCCTACTGTCTTGTCACCTCCAAGAAAGTCCAGGAGAGTAATGCCAGGGCGTGATGGGTCTGAAGGAAATTCTTTGCAAGGAGATAAGTTTGATGACAGTGTTGTTAGTGTCAGACAGGCAGCTGGTGATAATATGGGAAAGAATGAGCCAGCTCCAATGTCACTAGATTTTTCTCTTTTTGGATTAAAACCTCCAAATAGACCTACAATTACCAGTGCTGACAGATCACATTTAAAAAGAAAATTAGATCTAGAGTTCTAG 1236 0.4134 MAELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPSDIKSYLQMTLKGLAICHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARVFGSPDRRFTHQVFARWYRAPELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSASQWPDMIFLPDYVEYQHVPAPPLRSLFPMASDDALDLLSKMFTYDPKARISVPQALEHRYFSSAPLPTDPVKLSRPAPKKESKVSDVISNEGPTVLSPPRKSRRVMPGRDGSEGNSLQGDKFDDSVVSVRQAAGDNMGKNEPAPMSLDFSLFGLKPPNRPTITSADRSHLKRKLDLEF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00902 411 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00902 411 SUPERFAMILY Protein kinase-like (PK-like) 9 301 IPR011009 -
Gma07g00902 411 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Gma07g00902 411 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00902 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Gma07g00902 411 MobiDBLite consensus disorder prediction 300 354 - -
Gma07g00902 411 CDD STKc_CDK7 13 306 IPR037770 GO:0005675|GO:0008353|GO:0070985
Gma07g00902 411 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Gma07g00902 411 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00902 411 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 357 - -
Gma07g00902 411 PANTHER CELL DIVISION PROTEIN KINASE 9 357 - -
Gma07g00902 411 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00902 Gma-Chr7 9815594 9820182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00902 8 411 Core Cell Cycle Gene Families AT1G73690 76.980 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Gma07g00902 Pkinase 8.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00902 K02202 - gmx:100813673 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00902 07 9815594 9820182 Gma07g00902 07 9815594 9820182 ECH
Gma07g00902 07 9815594 9820182 Gma09g01654 09 42077046 42082165 GST
Gma05g02357 05 44457871 44463320 Gma07g00902 07 9815594 9820182 PCT
Gma08g00487 08 4047066 4051106 Gma07g00902 07 9815594 9820182 PCT
Gma07g00902 07 9815594 9820182 Gma05g02357 05 44457871 44463320 PCT
Gma07g00902 07 9815594 9820182 Gma08g00487 08 4047066 4051106 PCT