Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00899 ATGCCACTGAAGATAAGGGCGCCAGGCACACCATGGAAGATGCGTCGGTCATGCTTCTCGACATGTGCACACTTTGCTATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCGAAAGCATTTGCATCAGAATGTTCTTTCAGCAGGATTACCACGTTTCCTTAAAACTGATAAGTCTATTCTTCAAGAAAGTGCTGAAGGGGGGTGGCAGGATGGTGCTACAGCTGTATTTGTTTGGGTATTGGGACAAAGAGTTGTGGTTGCAAATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTAATGGATCCCAAAATCACCCAGATGGTGTCCAGACACAGCTGAAGGCCATTGTTTTGACTAGAGAACACAAACCTATCTTCCAACTGGAGCGTGCACGCATTGAGAAGgcagccttcattgctgcagttgatactgtttcagtgcccggtcactgcgtataccactggtcgcagttcgatgccgtcaaccaccttccgccgtcgtcattggaacgtctacgagcctttatggaccctttcagtaagacatctagctcttgttctctaaccatggctggatcttgccatggggaggatgattggaattgctaa 624 0.3125 MPLKIRAPGTPWKMRRSCFSTCAHFAIYDGHGGRLAAEYARKHLHQNVLSAGLPRFLKTDKSILQESAEGGWQDGATAVFVWVLGQRVVVANIGDAKAVLARSTNGSQNHPDGVQTQLKAIVLTREHKPIFQLERARIEKAAFIAAVDTVSVPGHCVYHWSQFDAVNHLPPSSLERLRAFMDPFSKTSSSCSLTMAGSCHGEDDWNC 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00899 207 SMART PP2C_4 1 196 IPR001932 -
Gma07g00899 207 ProSiteProfiles PPM-type phosphatase domain profile. 4 207 IPR001932 -
Gma07g00899 207 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 19 141 - -
Gma07g00899 207 PANTHER PROTEIN PHOSPHATASE 2C 19 141 IPR015655 GO:0004722|GO:0006470
Gma07g00899 207 SUPERFAMILY PP2C-like 19 143 IPR036457 -
Gma07g00899 207 CDD PP2Cc 25 154 IPR001932 -
Gma07g00899 207 Pfam Protein phosphatase 2C 20 141 IPR001932 -
Gma07g00899 207 Gene3D - 12 194 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00899 Gma-Chr7 9754374 9757816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00899 22 144 PP2C-type Phosphatase Gene Family AT1G18030 62.857 3.68e-50 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00899 K17500 - gmx:106799226 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00899 07 9754374 9757816 Gma07g00899 07 9754374 9757816 ECH
Gma07g00899 07 9754374 9757816 Gma09g01662 09 42133361 42138296 GST