Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00888 ATGGCAGAAAGAAGGAGAAGAAAGTGTTTGAATGACAGGCTTTCCATGCTAAGGTCAATAGTCCCTAAGATTAGCAAGATGGACAGGACCTCCATTCTTGGAGACACCATTGATTACATGAAAGAGCTTCTAGAAAGGATAGGCAAGTTGCAAGAAGAAGAAATGGAGGAGGGAACAAATCGGATAAACCTCTTGGGCATTTCTAAGGAGCTAAAGCCAAAAGAAGTAATGGTAAGAAATTCCCCCAAGTTTGATGTTGAGAGAAGAGACCAGGACACAAGGATTAGCATCTGCTGTGCCACAAAGCCAGGATTACTACTGTCCACAGTGAACACCTTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGCTTCAATGATTTTTCAATGCAAGCATCTTGCTCAGAGGTAGCAGAGCAGAGAAATTGTATGAGCCAGGAAGAGATAAAGCAAGCAATATTCAGAAATGCAGGTTATGGTGGTAGATGTCTCTAG 504 0.4226 MAERRRRKCLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEEMEEGTNRINLLGISKELKPKEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSMQASCSEVAEQRNCMSQEEIKQAIFRNAGYGGRCL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00888 167 CDD ACT_UUR-ACR-like 93 134 - -
Gma07g00888 167 PANTHER HELIX-LOOP-HELIX, PUTATIVE, EXPRESSED-RELATED 1 167 - -
Gma07g00888 167 SMART finulus 1 49 IPR011598 GO:0046983
Gma07g00888 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 43 IPR011598 GO:0046983
Gma07g00888 167 Pfam Helix-loop-helix DNA-binding domain 2 43 IPR011598 GO:0046983
Gma07g00888 167 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 167 - -
Gma07g00888 167 Gene3D - 1 59 IPR036638 GO:0046983
Gma07g00888 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 54 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00888 Gma-Chr7 9624096 9625020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00888 1 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 67.665 7.46e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g00888 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00888 - - gmx:100784145 320.857