Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00886 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGGGGGGGACATCTTGGTCTTCAGCTCATGCCTGGAATAATTGAACGAGACACAAAGCCATTTTTGCCTGGTCGTGAACCGGCTATGTTAATGGGTGCAAATGGAACTTTTCACCCACGAGATTGCGCTGTTTCAGAGGCACCAATGCCATTGAACTATGTCAGAGATAATTGGATAAACCCGAGACATAGGTTTTTTAATATGCAGCAGCCCACAAATCCTAGTTATGATGTTCTTCCAGAGACATCAGGAGCTCCTAACTTGCAAATTATACAGCCACCTGATTCGTCAAGTGACGAGAAAGTGGATAGAGTCGAAGAGGTAGTTTTCAAAAAGGAAGGTGGCCAGTCAAAGAAAAGGCAAACTAAGGGTGCTTCTTTGTTATCCACCTATGTGGTCTTTGACACAGATGTTGAGTTATTTGTTATCCAAGATTTTTCTGTTGTGGTACTTCTACCTAAAATTTGGATATTCCGCTTGGGAACAAGTTCAAGCACCATGAAACCGAAATTGATCCCTTACTCTTGCAGGCTATTTCCTCCAAGGCCAGAAGTGAACAAGATCCTATGGTTTCTCTATGCTGACAACATTACTACCACTAAATGTGGCTTGAAAGTCATGCCTGCATCTACATACCCTTTGCAAAGTGGTAATGCTACCCCTCAACAACTTGCTGCCTTTTCCAGTCCCCTAGAAGTGATTCTTGCAATTAATGTTGACAATCAAATGTACTGCCACCTTCTATGTGGCCTTAGGAATCTTGACCTTATACATGGAATTGCAACCCCTTATGCTATAGGCTTGATTAAAGCATTTGGTTTTTTGGAGTCCAAGTGGGAGCAGCTATGTGATGATCTTGACCATGGATTTCCATGTAATGAAATTTCTGAGGGGGCAATGAGGGAAGCTGTGACCAACACACTTGGTGGACCTCAGCCAGAATTGGCAAATAGAATAAGGTTAATCTGTGAAGGTAATAACTGGGGCGGAATTGTGTATAGATTGTGGCCAAACATTCGTTATATCAGGTGTGTTACCACTGGAAGCATGGAGCAGTACTACCAAAAGCTCAAGTATTATGCAGGAGAGGTACCTATTTTAGGAGAAGATTATTTTGCTTCAGAGTGCTGTGTTGGTCTAAATTTAGACATAATGCAACCCCCTGAGACAACGCAGTTTGTGATGCTTCCAAATTTTGCCTACTTTGAGTTTCTTCCATTTAACATAATTGAAGACAATGATGCTAGCAAGGAAGCTGTGGACTATAGCAGTGTAGAGGTTGGCAAGATGTATGAAGTGGTTGTCACTACTTACAGAGGATATTACCGATACCGTTTGGGCGATATAGTGAGAGTTGTTGGTTTCTATAATTCATCTCCACTAGTAGAGTATGTGATGAGAGCACCTAAAACTCCTGCTGACATTGTGACTGAGAAGGACTTGATTTCAGCAGTTGAAAATTTTCAACTTGCACTTAGAGGTGCTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGACCAGGAGTCAATGCCGAAGCAGTTGAAGGTATTTGTGGAAGTCCAAGAGGAATCTGATTTTCTGGAGGATAAGCTAGAGGAATCAGTTAGAGTTTTGAGAAGTTGTATCTCCTCTCTTGAGAGTGGGTTGGGAGCTATATACAAGGTGCAGAAGGATAAAGGTCAACTAAGGAGCTTACGAATATTCATCATAAGGCCTGGAGCTTTTGATCAGTTATCAGAATTAGCCATTAAAAATGGAACATCAACTAGTAATTCTTTAATTGTAATTTGA 1848 0.4123 MDDDVLNMPNWGYYEPFRGGHLGLQLMPGIIERDTKPFLPGREPAMLMGANGTFHPRDCAVSEAPMPLNYVRDNWINPRHRFFNMQQPTNPSYDVLPETSGAPNLQIIQPPDSSSDEKVDRVEEVVFKKEGGQSKKRQTKGASLLSTYVVFDTDVELFVIQDFSVVVLLPKIWIFRLGTSSSTMKPKLIPYSCRLFPPRPEVNKILWFLYADNITTTKCGLKVMPASTYPLQSGNATPQQLAAFSSPLEVILAINVDNQMYCHLLCGLRNLDLIHGIATPYAIGLIKAFGFLESKWEQLCDDLDHGFPCNEISEGAMREAVTNTLGGPQPELANRIRLICEGNNWGGIVYRLWPNIRYIRCVTTGSMEQYYQKLKYYAGEVPILGEDYFASECCVGLNLDIMQPPETTQFVMLPNFAYFEFLPFNIIEDNDASKEAVDYSSVEVGKMYEVVVTTYRGYYRYRLGDIVRVVGFYNSSPLVEYVMRAPKTPADIVTEKDLISAVENFQLALRGAMRIEIVEFASFLDQESMPKQLKVFVEVQEESDFLEDKLEESVRVLRSCISSLESGLGAIYKVQKDKGQLRSLRIFIIRPGAFDQLSELAIKNGTSTSNSLIVI 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00886 615 Pfam GH3 auxin-responsive promoter 177 609 IPR004993 -
Gma07g00886 615 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 173 609 IPR004993 -
Gma07g00886 615 Pfam GAGA binding protein-like family 1 139 IPR010409 -
Gma07g00886 615 SMART GAGA_bind_2 1 249 IPR010409 -
Gma07g00886 615 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 173 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00886 Gma-Chr7 9616684 9620571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00886 201 607 EF-hand Containing Proteins AT1G23160 33.813 3.76e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gma07g00886 GH3 1e-117 CL0378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00886 K14487 - gmx:100786829 821.617