Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00879 ATGCACCAACCTATAAGAATATCACCCCCACTAACTCTGTTTCTCCTCTGTTACCACTCTGCCCCCAAAACAGAGCAAAACAGAGGATCCACTCCACCACTACTCCTAATGGATCCTCCACCCCTCTCTGCCGCCACTCAAAAAAACCATCCCGAATCGGTAGAGTCCTTTTCTCCATGTTTCCGCGTTGCGGAAACGTGGACTGATGAGACTCTACCGGCGGTTCCTGGTGCCAAGCTGCGCCTCATGTGCAGCTACGGTGGCCACATTATGCCACGCCCTCACGACAAATCTCTCAGCTACATCGGTGGCGACACGAGGATCGTGGTGGTGGACCGCCACTCGTCGTTGAAAGATCTATGTTCACGGCTTTCCCGAACTATCCTCAATGGAAGACCCTTCACACTCAAGTACCAGCTTCCCAATGAAGACCTTGAGAGTCTTATCACTGTCACCACTGATGAAGACCTTGACAACATGGTGGAAGAGTATGATCGGATAATGGCAAAAGGTTCGGCTTCTTCGCGGCTCAGGGTGTTCCTGTTCTTCACCAAACCTGAGGCCACAGTTTCAATGGGGTCACTCCTTGATGATGCCAAGTCGGAGACATGGTTTGTTGATGCACTCAACAACTCTGGCATGATATCAAGAGTGGTGTCAGATTCTGCTGCCGGGGATTCTTTTGTTAACCTTGATGGTGTTGGTGTTGGTGGTGTTAGTGCTAGTGGTTCAAGCAACAACTTGGAGTCTTTGCCTGATGCTAACAAGGTTAAGAATTTTCCTGAAGTGGTGCAAGTGCAATCAACACCTGGTTCGCCTATGATGGAGAACAGTTCTTCTTCTCCTTCTTTCTCTCCTTCTCTGGTTAATCTGCCTCCAATTCGGGTTCATGTTGATGACAATGGTAGTAGGCTTCAGCAAGAGAATAAGGTTGGTTTGGTGGTGGAGGAGCAATTTGCTCAGATGACAATTGCAAGTGGGGTGAAGCCAGATGATGGATTGGTGAATGTTGTTTCTTCTGCAGTGGCTGTGCCTGTAATTCCTGCATCTGTGACTATGGCATCAGCTGGGGTGATTACTACTAGTGATAATGTGATGAATAGAGTTGTTTGTGAGGATGACAGATCAGATCCCGGGTTTCAGAAGCCCCCTTTACCATTGCAGCTTGTGCAGCCAAGGACTAGTGGTGGTGTGGGTTTGCCTTCACCTGATTCAGTTGCAAGTGATAGTAGTATTGCAGCTGCAAATTCTTTCTCCAAGACTGTTTACTACCAAGATCAAGTCCAAGCTGCACTACTAGACAACAAAATTGTTGCTATGCCAAATGCCAAGAGTGAAATATCTGATCAGATGATTCAGGTCCAAGGACAACTTCAAGATTCTGGCTACACATTACCCCCACAATTGGATCCAAACAAGCAACATTTCCAGCAGCAGAAGCCATTTGTCCATGCCAGCACTCACTACATCCACCACCCAGCAGCCACAGGTCCAGTGCCAGTTTCATCATACTACCCAGTTTATGCCCCACCACAACCTCAACAACTTCACCCTCCAATTGGTCAACAACAGTACCCAGTTTATGTAATGCCAGTTGGACCTACACAAGTAACACAACCCTACAACATGGCATTGCAGCCCAATATAGCTGATCCTAATGTGGTAGCTTCAAGCAGGTCATTAATGCCACAAAGTATTGTTACCTCAGCAGCATACAAAGATGGTACTCCACCTATTTACCCCACCAAGTCAGTTAGCTCTACTATGGCATCAAATTCTGGATATGCTCCAATACCTACCAACCAATTTCAACCACAGTATGTGGGTTTGCATCAGTTCCATCATCCACCACAGTCCATTGCTGTGGCTCCTTCTAGTACTACTACTAATAATAATTATGGTTATGAATATGGTGGCCATGTGCAAGACCAAGCTTACTACACTCAACAAACCACCACTGCTCCATTGCTTCCTCAGTACCAATCCATGACCCCAGCTGCAGCTGCTGCAGCACTATCAGATGCTTCAAAATAG 2034 0.47 MHQPIRISPPLTLFLLCYHSAPKTEQNRGSTPPLLLMDPPPLSAATQKNHPESVESFSPCFRVAETWTDETLPAVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRHSSLKDLCSRLSRTILNGRPFTLKYQLPNEDLESLITVTTDEDLDNMVEEYDRIMAKGSASSRLRVFLFFTKPEATVSMGSLLDDAKSETWFVDALNNSGMISRVVSDSAAGDSFVNLDGVGVGGVSASGSSNNLESLPDANKVKNFPEVVQVQSTPGSPMMENSSSSPSFSPSLVNLPPIRVHVDDNGSRLQQENKVGLVVEEQFAQMTIASGVKPDDGLVNVVSSAVAVPVIPASVTMASAGVITTSDNVMNRVVCEDDRSDPGFQKPPLPLQLVQPRTSGGVGLPSPDSVASDSSIAAANSFSKTVYYQDQVQAALLDNKIVAMPNAKSEISDQMIQVQGQLQDSGYTLPPQLDPNKQHFQQQKPFVHASTHYIHHPAATGPVPVSSYYPVYAPPQPQQLHPPIGQQQYPVYVMPVGPTQVTQPYNMALQPNIADPNVVASSRSLMPQSIVTSAAYKDGTPPIYPTKSVSSTMASNSGYAPIPTNQFQPQYVGLHQFHHPPQSIAVAPSSTTTNNNYGYEYGGHVQDQAYYTQQTTTAPLLPQYQSMTPAAAAAALSDASK 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00879 677 Pfam PB1 domain 95 182 IPR000270 GO:0005515
Gma07g00879 677 CDD PB1_UP2 83 182 - -
Gma07g00879 677 PANTHER OS05G0427100 PROTEIN-RELATED 37 676 - -
Gma07g00879 677 Gene3D - 100 183 - -
Gma07g00879 677 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 37 676 - -
Gma07g00879 677 SMART PB1_new 94 184 IPR000270 GO:0005515
Gma07g00879 677 ProSiteProfiles PB1 domain profile. 79 182 IPR000270 GO:0005515
Gma07g00879 677 SUPERFAMILY CAD & PB1 domains 95 192 - -
Gma07g00879 677 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00879 Gma-Chr7 9497364 9499950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00879 79 211 MAP Kinase Kinase Kinase AT5G57610 44.444 6.11e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00879 - - gmx:100808843 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00879 07 9497364 9499950 Gma07g00879 07 9497364 9499950 ECH
Gma07g00879 07 9497364 9499950 Gma09g01101 09 26895750 26898819 GST