Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00876 ATGGGCGAGCAAAGGTGTTTCAAGAATCGGCTTCCAAAGGAGGCGGTGGACGTGCATCATGCCTGTCTTAAATTTTCTCTCATCTCCTCACCCTTACTCTCTGTGTTGTCACTCTTGTCTGCCGCCGATGTTGAACCCATTGTCATCGTCAAAATCACCATTGTCGAACGTTCTTGCTCTGGCTCTGATCCCATCCCTGAAAGGGGAGTTCCAGTGGATGTTCGAATTCCGCCTCAAGGCCTTCGACAAATTCCAGTCCATGAAGGAACCCACGTGAACATCTGCTACTACTCTAAGTCGAAGAATAAGCCCTTACTCCAATCCCTCGACGACGCCAACCTAAAGCTTCCCCGCTACTTCGACAAGCTTAGCATCCCTCTCAATGAGCAAAAGAGCCTCGCCAATGTCATCATCGATGTAGTCCTCAACAGTGTCTTCATCGCCACAACGCACTGCAAAACCCTAGAAAAAGTTGACATCATTTTCTGCTCCATCTTCGAGGCCATTAAGAATTTGTTGAAGGAGCAAAATGAGGAAAGTGGACTTGTCAAAAGAAGCATTGCTTCAAGGACTTTGTTTCTATTATGTTTTGGACTCAAACATAGAGTGTTTGAGGTCTCCTTGGTTGATCTTCAAGGAGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTGAAGATGTGCAAGGGAAAAATGTTCTGACAAATTTATGGACAACTGATAACTACACATTGAGGATGTTTTGCATTGGAGTTACCAAGAGAATAACTAACCAAGTGAAGAGAACCTACTATGCACAATCAAGCCAGATTAGACAGATTTATAGGAAGATGAGGGAGATCATGACCAACCAGACAACATCCTATGATTTGAAGGAGTTGGTCCGCAAGTTTATTCTTCAGATCATTAGAAAAGAGATTGAGAAGGCAACATCTAGTATTTACCCTCAGCAGAATGTGTTTGATTGTAAAGTCAAGATCCTGAAACACTGCTAA 999 0.4344 MGEQRCFKNRLPKEAVDVHHACLKFSLISSPLLSVLSLLSAADVEPIVIVKITIVERSCSGSDPIPERGVPVDVRIPPQGLRQIPVHEGTHVNICYYSKSKNKPLLQSLDDANLKLPRYFDKLSIPLNEQKSLANVIIDVVLNSVFIATTHCKTLEKVDIIFCSIFEAIKNLLKEQNEESGLVKRSIASRTLFLLCFGLKHRVFEVSLVDLQGDEDHAFKKIRLRAEDVQGKNVLTNLWTTDNYTLRMFCIGVTKRITNQVKRTYYAQSSQIRQIYRKMREIMTNQTTSYDLKELVRKFILQIIRKEIEKATSSIYPQQNVFDCKVKILKHC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00876 332 SMART Ribosomal_S3Ae_2 181 332 IPR001593 GO:0003735|GO:0005840|GO:0006412
Gma07g00876 332 PANTHER 40S RIBOSOMAL PROTEIN S3A 240 330 - -
Gma07g00876 332 PANTHER 40S RIBOSOMAL PROTEIN S3A 182 240 - -
Gma07g00876 332 PANTHER 40S RIBOSOMAL PROTEIN S3A 182 240 - -
Gma07g00876 332 PANTHER 40S RIBOSOMAL PROTEIN S3A 240 330 - -
Gma07g00876 332 Pfam Ribosomal S3Ae family 237 330 IPR001593 GO:0003735|GO:0005840|GO:0006412
Gma07g00876 332 Pfam Ribosomal S3Ae family 197 237 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00876 Gma-Chr7 9462991 9466460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00876 183 330 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 58.757 7.12e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00876 K02984 - gmx:100813273 212.616