Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00862 ATGAGATTCAGGCGTGATCTCTTTGTGTGCTGCTTCACTAGCACATCTTCAGACACAATGCCAAAGGCAAAGCACAGAAAACTTGAAGATGGACATGAGATTACAATTCAGCGCTTTAACAGAGACCAGCACTACATATTGCAACAGTTTATCAATGAAACTATTATCCTAAATTACTTACCTCATAAAAATAGTGTCAGTTTACAGAAACTTCCGGATGGAGTTCCTGTGGATGCCACCCATGTTACTAGTGATAGAGCAGGGTCAAGTGGTTATATGGACCCAGAGTATTTGACAAAGGGCCAGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTAGCGAAAGACTGGGTTCTGAATGAAGTGGATAACCTTGTTTCCATTTTAAGCAGAAAAATTGAAAACCAAGCTTTGGTGGAGCTGTTAGATCCAAGACTTGGCTTCGAATCAAACCTTAAGATCAAACAGGTTATGACTGTTACAGCTAAACTTGCACTTAAGCGCATGAAATTAATGTCCACAAGAATTAAGACCCAGGGTAAAAGGTTTTTTTTTTCTGTTTTTTTCATACTCTTGTCTTGTAATTCAGAGATCTCAGTTTTGAAAATCTTTCACGGTGCTGAACTTGAAGAAGCTACTAACAATTTTGACACTTGCCTTGGAAAGGGAGGGTATGGAAGCATATACTATGGAAAACTTGGGCGAGAGGTTGCAGTAAAATGTTTCCATGTTGAGAACGAGACAGAAGAGACCATTAAACAATTCATGAAAGAAACTGCAATCTTAAGTCTCCTGCACCATCAAAATCTGATTGAATCCGTTGAAACTTCTGCTGCCTTGGTATTTCTTCATGACTCAGGTCATGCTACTCATGTTTCAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCAGTCACAAAAGTGATGTCTATAGTTTTGGGTTGGTCTTGTTCAAACTCATATCATCCATCCGCCAAGTTTAA 1044 0.3927 MRFRRDLFVCCFTSTSSDTMPKAKHRKLEDGHEITIQRFNRDQHYILQQFINETIILNYLPHKNSVSLQKLPDGVPVDATHVTSDRAGSSGYMDPEYLTKGQLSVKNDVYSFGVVLCELLSSKLAKDWVLNEVDNLVSILSRKIENQALVELLDPRLGFESNLKIKQVMTVTAKLALKRMKLMSTRIKTQGKRFFFSVFFILLSCNSEISVLKIFHGAELEEATNNFDTCLGKGGYGSIYYGKLGREVAVKCFHVENETEETIKQFMKETAILSLLHHQNLIESVETSAALVFLHDSGHATHVSTIPVGTRAYIDPDYYESGRVSHKSDVYSFGLVLFKLISSIRQV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00862 347 Pfam Protein tyrosine and serine/threonine kinase 228 285 IPR001245 GO:0004672|GO:0006468
Gma07g00862 347 Pfam Protein tyrosine and serine/threonine kinase 82 121 IPR001245 GO:0004672|GO:0006468
Gma07g00862 347 Gene3D Transferase(Phosphotransferase) domain 1 60 190 - -
Gma07g00862 347 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 300 343 IPR044652 -
Gma07g00862 347 SUPERFAMILY Protein kinase-like (PK-like) 79 142 IPR011009 -
Gma07g00862 347 PANTHER TYROSINE KINASE FAMILY PROTEIN 69 282 - -
Gma07g00862 347 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 68 IPR044652 -
Gma07g00862 347 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 69 282 IPR044652 -
Gma07g00862 347 Gene3D Phosphorylase Kinase; domain 1 203 288 - -
Gma07g00862 347 PANTHER TYROSINE KINASE FAMILY PROTEIN 300 343 - -
Gma07g00862 347 Gene3D Transferase(Phosphotransferase) domain 1 289 346 - -
Gma07g00862 347 PANTHER TYROSINE KINASE FAMILY PROTEIN 29 68 - -
Gma07g00862 347 ProSiteProfiles Protein kinase domain profile. 225 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00862 347 ProSitePatterns Protein kinases ATP-binding region signature. 231 251 IPR017441 GO:0005524
Gma07g00862 347 SUPERFAMILY Protein kinase-like (PK-like) 197 342 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00862 Gma-Chr7 9315374 9318071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00862 212 343 Receptor kinase-like Gene Family AT1G25390 32.558 1.83e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma07g00862 PK_Tyr_Ser-Thr 5.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00862 - - gmx:100776297 368.237