Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00860 ATGCGCGCAAGAGAAACAATGGATTGCAAAGAGCATATCCCCATGCTCCGTACGGTGGTACTCACCGTCTCTTGGTTGTTGTTAATCACTCTGCCATACTGTGAAGCCGCATACAATTATTCGGAATGCAAAGAGCAAACATACAAATGCGGAAGTCTGATCAACATATCGTATCCTTTCTGGGGACACGACCAGCGAGACTCTGAATGTGGTGGCGGTGACCTATTCGAGCTCAAATGCTATGATGATGATACTACAGCTCTAATTGGCTCTCAAAATTACACGGTGAAGGAGATCGACATCACCACTTACACCATGAGACTGGTCCGAACAGACCTTGCCCGTGATGTTTGCTCTCCGCAATTTGGTGACACTTATCTGAACCCTACTCTGTTCTCGTATACCCCTAAAGTGTACAACGTCACCATATTCTACGATTGTCCCATCACATATCCACCGCCTCCACACAGCATTACGTGCGGGTATGCTGTCCCTAATATTGGGGAGGGATTTCAGGATCCACTTTTAGAGCAGTGCGAGCGACGTTTGCACGTGCCGACTGACGTTCCTCAAGTTGATTATGGTGGTAGAACTGCTGTCGAAAAGGCTCTTGATAAAGGGTTTGAGGTCAAGTATACTGTTTCTCAAGATTGCACAACATGCCTGGGAAGTGAAGGAAATTGCTCGAGACATGATGCTCATTTTTACCAAACTTTATGCCATTATTGCCCTGATGGATCTCACGCCCTACACTGTTCTAAAAGAAAAATTAATTGGAAGGTGAAACTCATTATAGGTGTTGTTTCTGGAGTGGTGGGGGCACTTGCTGTGGGCATTATCGGCTATCTCTGTTATCGTAAAAAGAAGAATCGTTATACAATGTCATATACACAATCTCGGAGCCTCTCTTCTGATCCATCTTCAAAAGACACTGAGAAGGGAATTCAACGCTTTACTCAAAGCTTTGTACCTGGAGTGCACCTCTTCACATATGATGAACTTGAAGAGGCCACAAATTACTTTGACTCATCTAAAGAACTAGGAGAAGGGGGCTTTGGAACAGTGTATTTTGGCAAACTGCGGGATGGGCGTTCTGTTGCAGTGAAGAGGTTGTATGAGAACAACTTTAAGAGAGTTGCACAGTTCATGAATGAAATTAAAATCCTAGCAAATTTGGATCATCCAAATCTTGTGACATTATTTGGATGCACCTCTCGCCACACCCGTGAACTTCTGCTTGTATACGAGTACATTCCTAATGGAACCATTGCCGATCATCTTCATGGTCAACGATCCAAACCTGGAAAACTCTCTTGGCATATTAGAATGAATATTGCTGTGGAGACCGCAAGTGCATTGAAATTTCTTCATCAAAAAGACATAATCCACCGAGATGTGAAAACCAACAATATTCTTCTTGACAATAACTTTTGTGTAAAAGTGGCCGATTTTGGACTCTCACGTCTTTTCCCAGATCATGTCACTCATGTTTCAACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCCGAGTACCACCAGTGCTATCAGCTTACTAAACAAAGCGATGTCTATAGCTTTGGAGTGGTGCTGGTTGAGCTGATATCGTCCTTGCCTGCTGTAGATATTACAAGGCATAGACAAGAAATCAAATTGTCCGACATGGCCATCAACAAGATTCATAGTGAGGCACTGCATGAGCTAGTGGACCCTAGCCTTGGGTTTGAATCGAATTTCAAGGTCAGGAAAATGATAAATGCTGTGGCAGAGTTAGCATTTCAGTGCTTGCAGAGTTCCAAAGAGATGAGGCCTTCTATGGAAGAAGTGGCAGACACTCTCAAGGATATACAGAGTGATGGCAAACATAAAAGCCAGCCTGAGGTAATGGATATCACAAGCACAGCTGATGATGTTGTGTTGCTGAAGGATGACCCTCCTCCACCATCACCTGATTCTAATGCGGTGAGCAAGTTGACAACACCAAATGCTAGCGGTTAA 1998 0.4404 MRARETMDCKEHIPMLRTVVLTVSWLLLITLPYCEAAYNYSECKEQTYKCGSLINISYPFWGHDQRDSECGGGDLFELKCYDDDTTALIGSQNYTVKEIDITTYTMRLVRTDLARDVCSPQFGDTYLNPTLFSYTPKVYNVTIFYDCPITYPPPPHSITCGYAVPNIGEGFQDPLLEQCERRLHVPTDVPQVDYGGRTAVEKALDKGFEVKYTVSQDCTTCLGSEGNCSRHDAHFYQTLCHYCPDGSHALHCSKRKINWKVKLIIGVVSGVVGALAVGIIGYLCYRKKKNRYTMSYTQSRSLSSDPSSKDTEKGIQRFTQSFVPGVHLFTYDELEEATNYFDSSKELGEGGFGTVYFGKLRDGRSVAVKRLYENNFKRVAQFMNEIKILANLDHPNLVTLFGCTSRHTRELLLVYEYIPNGTIADHLHGQRSKPGKLSWHIRMNIAVETASALKFLHQKDIIHRDVKTNNILLDNNFCVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHQCYQLTKQSDVYSFGVVLVELISSLPAVDITRHRQEIKLSDMAINKIHSEALHELVDPSLGFESNFKVRKMINAVAELAFQCLQSSKEMRPSMEEVADTLKDIQSDGKHKSQPEVMDITSTADDVVLLKDDPPPPSPDSNAVSKLTTPNASG 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00860 665 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 23 654 IPR044652 -
Gma07g00860 665 MobiDBLite consensus disorder prediction 616 665 - -
Gma07g00860 665 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 23 654 - -
Gma07g00860 665 ProSiteProfiles Protein kinase domain profile. 341 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00860 665 Pfam Wall-associated receptor kinase C-terminal 174 245 IPR032872 -
Gma07g00860 665 Gene3D Transferase(Phosphotransferase) domain 1 418 630 - -
Gma07g00860 665 Gene3D Phosphorylase Kinase; domain 1 313 417 - -
Gma07g00860 665 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00860 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Gma07g00860 665 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Gma07g00860 665 Pfam Wall-associated receptor kinase galacturonan-binding 43 110 IPR025287 GO:0030247
Gma07g00860 665 SUPERFAMILY Protein kinase-like (PK-like) 320 617 IPR011009 -
Gma07g00860 665 SMART serkin_6 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00860 Gma-Chr7 9271657 9279165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00860 204 665 Receptor kinase-like Gene Family AT1G25390 50.417 1.26e-143 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma07g00860 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00860 - - gmx:100800873 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00860 07 9271657 9279165 Gma07g00860 07 9271657 9279165 ECH
Gma07g00860 07 9271657 9279165 Gma09g01683 09 42392352 42402668 GST