Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00859 ACTCCGCCGTCACCTCAGCTGCTCAAGCCACCTCCATCACCCGCGCGCACCGCATTCATAAccgtgccacttccgcccgccacaacacctccaccgtcacctccgccagccacgacgcctccgtcgccacctccaccagccacgacgACCCCGCCGCCGCCTCTGCCATCCATGTCGCTTGCACCTCCATGTCCTACACCCGTGCCACCAGTCACCGCACCCTTGCCGACTCCACGTCTCATGCCAGTTGCCGGCCTCCCCGATCTCTGCCACACTCGCGCCATTGTTTCTTATAACAACCTCTTCGGTATTGTTGCTTCGTGTAGCCGGGTTGCAAGTGCTGTAATGGGAGGATTCATGATATGCATCATAATTTGTTGCTTTAGATACAAGTTATTAACCCAACCAATCAAACTTTGTTCGACCACAAAGAGTGATCAAGACATTGAAGCATTCTTAAAAAATAAAGGAGCTGTAGCACAAAAAAGATACAAATTTTCAGAAGTCAAGAAAATGACCAATTCCTTCAAAGTTAAACTGGGTCAAGGGGGTTTTGGTGCCGTATACAAAGGACAGCTAGTCAGTGGTTGTCCTGTGGCTGTAAAATTATTGAACTCATCCAAAGGAAATGGTGAAGAATTTATCAATGAGGTTGCTACCATCAGTAGAACCTCTCATGTTAACATTGTGACCCTTCTTGGATTTTGTTTGGAAGGCCGCAAAAAAGCTCTCATCTATGAGTTTATGGACAATGGTTCCCTTGAAAAGTTTATTTACAAAAAAGGGTCACAAACCATTGTATCTTTGAGTTGGGAGAATTTGTGTCAAATCTCAATAGGGATTGCTCGAGGGTTGGAGTACTTGCATAGGGGATGCAACACTCGAATTCTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTTTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCCAGAAAAGAGAGTATTATTTCCATGTCAGATACTAGAGGGACAATGGGGTATTTAGCACCAGAAATGTGGAATAGACGTTTCGGTGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGGATGATGTTGCTAGAAATGGTAGGAGGGAGGAAGAACATTGATGCTGAAGCCAGTCACACAAGTGAGATATACTTCCCGCATTTGGCATACAAGAGGCTTGAGTTGGACAATGATTTAAGAACAGATGAGGTTATGACCACGGAAGAAAATGAGATTGCAAAGAGAATAACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATAATCGACCTACAATGAGTAGAGTGATAGAAATGTTGGAAGGCAGCATGAATTCTTTGGAAATGCCACCAAAACCTATGTTTTCTTCTCCTACTAGATCGGCAACTCCTCTTGAAATTACAAAGCTCTGTCCCAGAAAAGACAGCATTATATCTATGTCAGATACTAGAGGGACACTGGGGTATGTAGCTCCAGAAATGTGCAATAGACATTTTGGTGGTGTTTCGCACAAATCTGATGTTTATAGCTATGGGATGCTGCTGCTAGAAATGGTAGGAGGGAGGAAGAATATTAATGCTGAAGCTAGTCATACAAGTGAGATATACTTCCCGCATTTGGTATACGGGAGACTTGAGTTGGACAATGATGTAAGGCCAGATGAGCTAATGACCGCAGAAGAAAATGAGATTGCAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGATAGACCAACTATGAGTAGAAAAATTTACCCATGTATTACTAATTTTTTTATACAACCACCAGCAACAACACAGACACAACAAGTAAAAATACTACCAAGATTGGGACGATCAACAACACTGCCACCATTATCGCCACCACCAACTTTTTTATCGCCAACTGGGTCACCAGCACAAGTAACAACATTTTCGTCACCATCAATACTAATACGAGTGTCAGGTAACCACCAATTTTGGAAAACGAAAGTCGTTATAGGGGTTGTAAGTGCTGTAATGGGAGGATTCATGATATGCATCATAATTTGTTGTTTTAGATACAAGTTATTAATCCAACCAATCAAACTTTGTTCGACCACAAAGAGTGATCAAGACATTGAAGCATTCTTAAAAAATAAAGGAGCTGTAGCACAAAAAAGATACAAATTTTCAGAAGTCAAGAAAATGACCAATTCCTTTAAAGTTAAACTGGGTCAAGGGGGTTTTGGTGCCGTATACAAAGGACAGCTACCCACTGGTTGTCCTGTGGCTGTTAAATTATTGAACTCATCCAAAGGAAATGGTGAAGAATTTACCAATGAGGTTGCTAGCATCAGTAGAACCTCTCATGTTAACATTGTGACCCTTCTTGGATTTTGTTTGAAAGGCCGCAAAAAAGCTCTTATCTATGAGTTTATGGCCAATGGTTCGTTGGACAAGTTTATCTACAACAGAGGACCAGAAACCATTGCATCTTTGAGATGGCAGAATTTGTATCAAATCTCAATAGGGATAGCGCGAGGATTGGAGTACTTGCATAGGGGATGCAACACTCGAATTCTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTTTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCCAGAAAAGAGAGCATTATTTCCATGTCAGATACTAGAGGGACACTGGGGTATGTAGCTCCAGAAATGTGGAATAGACATTTCGGTGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGGATGATGTTGCTAGAAATGGTAGGAGGGAGGAAGAACATTGATGCTGAAGCCAGTCGCACAAGTGAGATATACTTCCCGCATTTGGCATACAAGAGGCTAGAGTTGGACAATGATTTAAGACCAGATGAGGTTATGACCACAGAAGAAAATGAGATTGCAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGATCGACCTATAATGAGTAGAGTGATAGAAATGTTGGAAGGCAGCATGAATTCCTTGGAAATGCCACCAAAACCTATGCTTTCTTCTCCTACTAGATCGGCAACAGAGTCTTCCTCTTGA 3117 0.3985 TPPSPQLLKPPPSPARTAFITVPLPPATTPPPSPPPATTPPSPPPPATTTPPPPLPSMSLAPPCPTPVPPVTAPLPTPRLMPVAGLPDLCHTRAIVSYNNLFGIVASCSRVASAVMGGFMICIIICCFRYKLLTQPIKLCSTTKSDQDIEAFLKNKGAVAQKRYKFSEVKKMTNSFKVKLGQGGFGAVYKGQLVSGCPVAVKLLNSSKGNGEEFINEVATISRTSHVNIVTLLGFCLEGRKKALIYEFMDNGSLEKFIYKKGSQTIVSLSWENLCQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDTRGTMGYLAPEMWNRRFGGVSHKSDVYSYGMMLLEMVGGRKNIDAEASHTSEIYFPHLAYKRLELDNDLRTDEVMTTEENEIAKRITIVGLWCIQTFPNNRPTMSRVIEMLEGSMNSLEMPPKPMFSSPTRSATPLEITKLCPRKDSIISMSDTRGTLGYVAPEMCNRHFGGVSHKSDVYSYGMLLLEMVGGRKNINAEASHTSEIYFPHLVYGRLELDNDVRPDELMTAEENEIAKRMTIVGLWCIQTFPNDRPTMSRKIYPCITNFFIQPPATTQTQQVKILPRLGRSTTLPPLSPPPTFLSPTGSPAQVTTFSSPSILIRVSGNHQFWKTKVVIGVVSAVMGGFMICIIICCFRYKLLIQPIKLCSTTKSDQDIEAFLKNKGAVAQKRYKFSEVKKMTNSFKVKLGQGGFGAVYKGQLPTGCPVAVKLLNSSKGNGEEFTNEVASISRTSHVNIVTLLGFCLKGRKKALIYEFMANGSLDKFIYNRGPETIASLRWQNLYQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDTRGTLGYVAPEMWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNIDAEASRTSEIYFPHLAYKRLELDNDLRPDEVMTTEENEIAKRMTIVGLWCIQTFPNDRPIMSRVIEMLEGSMNSLEMPPKPMLSSPTRSATESSS 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00859 1038 SUPERFAMILY Protein kinase-like (PK-like) 162 448 IPR011009 -
Gma07g00859 1038 ProSiteProfiles Protein kinase domain profile. 174 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00859 1038 MobiDBLite consensus disorder prediction 1021 1038 - -
Gma07g00859 1038 ProSiteProfiles Protein kinase domain profile. 738 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00859 1038 SUPERFAMILY Protein kinase-like (PK-like) 726 1012 IPR011009 -
Gma07g00859 1038 SUPERFAMILY Protein kinase-like (PK-like) 484 645 IPR011009 -
Gma07g00859 1038 PRINTS Proline rich extensin signature 23 35 - -
Gma07g00859 1038 PRINTS Proline rich extensin signature 2 18 - -
Gma07g00859 1038 PRINTS Proline rich extensin signature 36 57 - -
Gma07g00859 1038 PRINTS Proline rich extensin signature 63 79 - -
Gma07g00859 1038 Gene3D Transferase(Phosphotransferase) domain 1 813 1021 - -
Gma07g00859 1038 Gene3D Transferase(Phosphotransferase) domain 1 249 457 - -
Gma07g00859 1038 Gene3D Phosphorylase Kinase; domain 1 702 812 - -
Gma07g00859 1038 Pfam Protein tyrosine and serine/threonine kinase 481 594 IPR001245 GO:0004672|GO:0006468
Gma07g00859 1038 Pfam Protein tyrosine and serine/threonine kinase 177 447 IPR001245 GO:0004672|GO:0006468
Gma07g00859 1038 MobiDBLite consensus disorder prediction 1 63 - -
Gma07g00859 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Gma07g00859 1038 CDD STKc_IRAK 744 1013 - -
Gma07g00859 1038 Gene3D Phosphorylase Kinase; domain 1 148 248 - -
Gma07g00859 1038 Gene3D Transferase(Phosphotransferase) domain 1 469 601 - -
Gma07g00859 1038 ProSitePatterns Protein kinases ATP-binding region signature. 180 202 IPR017441 GO:0005524
Gma07g00859 1038 SMART serkin_6 738 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00859 1038 SMART serkin_6 174 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00859 1038 ProSitePatterns Protein kinases ATP-binding region signature. 744 766 IPR017441 GO:0005524
Gma07g00859 1038 CDD STKc_IRAK 180 449 - -
Gma07g00859 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 860 872 IPR008271 GO:0004672|GO:0006468
Gma07g00859 1038 Pfam Protein kinase domain 741 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00859 1038 MobiDBLite consensus disorder prediction 1018 1038 - -
Gma07g00859 1038 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 474 597 - -
Gma07g00859 1038 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 664 1037 - -
Gma07g00859 1038 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 111 469 - -
Gma07g00859 1038 PANTHER RUST RESISTANCE KINASE LR10-RELATED 474 597 IPR045874 GO:0004672
Gma07g00859 1038 PANTHER RUST RESISTANCE KINASE LR10-RELATED 664 1037 IPR045874 GO:0004672
Gma07g00859 1038 PANTHER RUST RESISTANCE KINASE LR10-RELATED 111 469 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00859 Gma-Chr7 9197118 9270909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00859 474 597 Receptor kinase-like Gene Family AT4G18250 53.488 4.11e-34 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma07g00859 Pkinase 8.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00859 - - gmx:100799268 733.021