Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00857 ATGTATCAGGTGAGAGGAATGGATGTCAATAATCATATCCCCATGCTCCTTACGTCCCTACGCACCATCTCTTGGTTATTGTTAACCACTTTGCCTCAGTCTCAGTCTCAACCACCCGCTGATCACAGTTTTTCTGTTTGTAATGAGCAGTCATACAACTGCGGAACATTGTCCAACATCTCCTATCCTTTCTGGGGACTCAACCGATCCCGTCAATGTGGCCGCGGTGGTGACGCATTCAAGCTCACATGCCATGATGATAAGACTACTTCAATCCGAATTGCCACTCAAAATTTCACAGTGAAGGACATCAACATCACCGCTCAAACCATGATATTGGTGCGAGCAGACCTTGCCCTCAACGTGTGTTCTCCGCAATTTGGGGACACTTATTTGAGTTCTAGTCTGTTCCAGTATGGTTCATCCGTGTACAACATCACCATATTCTACAATTGCTCCTCCACATCCTATATAGATACCAGTCTTGCGGCATTCAAGTGCGGATATGAGAATACTCTCTTTACTGATGGTGTAGAATATGAGCTGTTGAGAACATTTCCATGGCTTGAGAGATGCGGGCGACAAGTCCAAGTGCCGCTAGATGTCGTTTATGATAGTAACGGTGGGCGTGATTTTCTGAAACAAGCTTTCACTAGCGGCTTTCTGGTCAACTATACTGTTCTCAACACTGTTACTGTTGACAATAGTAAAGTTAATTTGACAAGGAAAATCATCGTAGCTGTTGGTGTGGTAATGGGAGGATTCATAACATGCATCGTAATAATTTACTGTTGTAGCTGTAAATATATGTCATCAACACAAGTAAAATTTTGGTTGACGGGAAAGAATGACCTAGATATCGAAGCATTCTTAAAAGATCGTGGAACTCTAGCACAAAAGAGATATAAATTTTCAGAAGTCAAGAAAATGACCAACTCCTTCAAAGTTAAACTGGGTGAAGGTGGCTTTGGTGCTGTATACAAAGGAGAGCTACTCAGTGGTTGCCCTGTGGCCGTAAAAATATTAAATTCATCTAAAGGAAATGGTGAAGGCTTTATCAATGAGGTTTCTAGCATTAGTAGAACTGCTCATGTTAATGTTGTCACACTTTTTGGATTCTGCTTGGAAGGCAGCAAGAAAGCTCTCATCTATGAATTTATGCATAATGGTTCCCTTGACAAGAAAGAGAGCATTATTTCCATGTCATATGCTAGAGGGACAGTAGGATATGTTGCTCCAGAAGTGTGCAACAAACACTTTGGTGGAATTTCACACAAATCTGATGTCTACAGCTATGGAATGATGCTGCTTGAAATGGTGGGAGTGAAGAAGAATATTAATGCAGAAGTCAGTCAGACAAGTGAGTACTTCCCAGATTGGATATATAGCAGGCTAGAGCAGGGTGGAGATTTGACAACTGATGGGGAGATAGCCACAGAAGAAAAAGAGATGGCAAGGAGAATGACTATAGTGGGCTTATGGTGTGTTCAAACAATTCCACAAGATAGACCTACAATGAGTAGAGTAATAGATATGCTAGAAGGCAACATGAATTCCCTAGAAATGCCTCCAAAACCTGTTCTTTCTTCTCCAGCTAGATCGGTGCCAGAATTTACCACTAGTTCTTTGCAATCTGGGTAG 1641 0.4174 MYQVRGMDVNNHIPMLLTSLRTISWLLLTTLPQSQSQPPADHSFSVCNEQSYNCGTLSNISYPFWGLNRSRQCGRGGDAFKLTCHDDKTTSIRIATQNFTVKDINITAQTMILVRADLALNVCSPQFGDTYLSSSLFQYGSSVYNITIFYNCSSTSYIDTSLAAFKCGYENTLFTDGVEYELLRTFPWLERCGRQVQVPLDVVYDSNGGRDFLKQAFTSGFLVNYTVLNTVTVDNSKVNLTRKIIVAVGVVMGGFITCIVIIYCCSCKYMSSTQVKFWLTGKNDLDIEAFLKDRGTLAQKRYKFSEVKKMTNSFKVKLGEGGFGAVYKGELLSGCPVAVKILNSSKGNGEGFINEVSSISRTAHVNVVTLFGFCLEGSKKALIYEFMHNGSLDKKESIISMSYARGTVGYVAPEVCNKHFGGISHKSDVYSYGMMLLEMVGVKKNINAEVSQTSEYFPDWIYSRLEQGGDLTTDGEIATEEKEMARRMTIVGLWCVQTIPQDRPTMSRVIDMLEGNMNSLEMPPKPVLSSPARSVPEFTTSSLQSG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00857 546 MobiDBLite consensus disorder prediction 521 546 - -
Gma07g00857 546 ProSiteProfiles Protein kinase domain profile. 312 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00857 546 Gene3D Phosphorylase Kinase; domain 1 290 386 - -
Gma07g00857 546 SUPERFAMILY Protein kinase-like (PK-like) 301 538 IPR011009 -
Gma07g00857 546 Pfam Wall-associated receptor kinase galacturonan-binding 47 114 IPR025287 GO:0030247
Gma07g00857 546 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 225 IPR045874 GO:0004672
Gma07g00857 546 PANTHER RUST RESISTANCE KINASE LR10-RELATED 241 394 IPR045874 GO:0004672
Gma07g00857 546 PANTHER RUST RESISTANCE KINASE LR10-RELATED 394 542 IPR045874 GO:0004672
Gma07g00857 546 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Gma07g00857 546 Pfam Protein tyrosine and serine/threonine kinase 314 394 IPR001245 GO:0004672|GO:0006468
Gma07g00857 546 Pfam Protein tyrosine and serine/threonine kinase 399 513 IPR001245 GO:0004672|GO:0006468
Gma07g00857 546 Gene3D Transferase(Phosphotransferase) domain 1 394 525 - -
Gma07g00857 546 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 14 225 - -
Gma07g00857 546 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 241 394 - -
Gma07g00857 546 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 394 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00857 Gma-Chr7 9099518 9104821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00857 40 542 Receptor kinase-like Gene Family AT1G66910 28.481 1.71e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma07g00857 PK_Tyr_Ser-Thr 1.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00857 - - gmx:100793451 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00427 08 3576927 3580586 Gma07g00857 07 9099518 9104821 PCT
Gma07g00857 07 9099518 9104821 Gma08g00428 08 3583663 3586161 PCT