Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00856 ATGGATGAGCATAATCACATCCATATGCATATTCCCATGCTTCTTACATCCATAGTTATATTGTTAACCACTTTGCCACAGTCCTACTGTGATTTCGATTATTCTGTTTGTAAGGAGAGGCCATACAACTGCGGGAACCTGTCCGACATCTTCTATCCTTTCTGGGGACAGAACCGACCTCTTCAATGTGGCGGCGGTGGCCAAACATTCGAACTCAAATCCCATGATGACGATAATACTACAATTCTAATTGGCTCACAAAATTTCACAGTGAAGGAGATTAACACCAACGCTCAAACCATGAGAGTGGTGCAAACAGACCTTGTCCTCAATTTTTGTTCTCCGCAATTTGAGGACACTTACGTAAACTCCACTCAGTTCCGGTACTCCCCTTCAGTGTACAACATCACCATATTCTACGATTGTCTGCGCGTGACAGATTTCTCTCATGGTTTTGGACAGAACTTTACGTGCGGGGATGTTTTGTCTTATTTTGTAGTGGAATATGAGGTGCTGTCAAATGAATTTCCGCGTTGCAAGCGACGTTCTCACGTGCCGGCTGAGGCTCCTCTGGATTATACTGCTCCTGGTGCCGGATATAATAATTTGATACAAGTTATTGATAGAGGGTTTGAGTTCAGGTATGATGTTTCTCAAGATTGCACAAGATGCCTGGGAAGTGAAGGAGAATGCTGGAGCGATTGTAATGATATTGATCaacatgtactttcatgttattattgtccagatggatctcatgccctgcactgttctccttccaaaaGTGAACATAATATATCAAGGAAAATCATCATCTTATTAGGTGTTGCAAGTGTGGTAATTGGGGGCTTCATGATATGCATCATTATTTGCTGTAGTAAATATTGGCCAACAGATCAActTTGTCCCAGGAAAAAGAGCACTATTTCCATGTCAGATGCTAGAGGAACAATTGGGTATGTAGCTCCTGAAGTGTGGAATAGACATTTTGGTGGAATTTCACACAAGTCTGATGTTTATAGTTATGGAATGATGTTGCTAGAAATGGTAGGAGGGAGGAAAAATATTAATGCTGAAGCGAGTCACACAAGTGAGATATTCTTCCCACACTGGGTATATAACAGGCTAGAGCATGACAGTGACTTGAGGTCTGATGGGGTGATGGCCATAGAAGAAAATGAGGTAGCAAGGAGAATGACTCTAGTCGGTTTATGGTGCGTTCAAACGATTCCAAAAGATAGACCTACAATGAGCAAAGTAATAGATATGCTAGAAGGCAACATAAATTCCCTTGAAATGCCCCCAAAGCCTCTGTTTTCTTCTCCCACTAGATCAGTACCAAAATCTCCCATTAGTTAA 1359 0.3966 MDEHNHIHMHIPMLLTSIVILLTTLPQSYCDFDYSVCKERPYNCGNLSDIFYPFWGQNRPLQCGGGGQTFELKSHDDDNTTILIGSQNFTVKEINTNAQTMRVVQTDLVLNFCSPQFEDTYVNSTQFRYSPSVYNITIFYDCLRVTDFSHGFGQNFTCGDVLSYFVVEYEVLSNEFPRCKRRSHVPAEAPLDYTAPGAGYNNLIQVIDRGFEFRYDVSQDCTRCLGSEGECWSDCNDIDQHVLSCYYCPDGSHALHCSPSKSEHNISRKIIILLGVASVVIGGFMICIIICCSKYWPTDQLCPRKKSTISMSDARGTIGYVAPEVWNRHFGGISHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIFFPHWVYNRLEHDSDLRSDGVMAIEENEVARRMTLVGLWCVQTIPKDRPTMSKVIDMLEGNINSLEMPPKPLFSSPTRSVPKSPIS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00856 452 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 294 IPR045874 GO:0004672
Gma07g00856 452 SUPERFAMILY Protein kinase-like (PK-like) 306 445 IPR011009 -
Gma07g00856 452 Pfam Wall-associated receptor kinase C-terminal 174 247 IPR032872 -
Gma07g00856 452 Gene3D Transferase(Phosphotransferase) domain 1 271 438 - -
Gma07g00856 452 ProSiteProfiles Protein kinase domain profile. 55 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00856 452 PANTHER RUST RESISTANCE KINASE LR10-RELATED 300 448 IPR045874 GO:0004672
Gma07g00856 452 Pfam Protein kinase domain 307 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00856 452 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 14 294 - -
Gma07g00856 452 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 300 448 - -
Gma07g00856 452 Pfam Wall-associated receptor kinase galacturonan-binding 37 104 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00856 Gma-Chr7 9094566 9098089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00856 300 439 Receptor kinase-like Gene Family AT1G66980 51.724 3.11e-44 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma07g00856 Pkinase 9.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00856 - - gmx:100792936 615.92